Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0787 ATGCATTCATTCCGCAACCAAAAAACCGATAACGAACCCGGTTCAGCTCCACCTCCTCGAACCGACCGGTCCAACTCATCCTTATCATCAGAGTTACACCACCACCACCACTACATGCCGCCGTCAAAACCTCCTTCCTTCCGATCCCTCTCCTCATGTAGCCGCAGCACCCGCGGCACCACCCCTTCCTCCTCCTCCTCCTCCCAGCAGGTGCAGCGTTCCGTTTCCGCCAGGTTCAATCGCCAGAACACCACGCGCGGTGAGGTTGTGCTTAATGATGTAGTTGGGAATGGAATATCTGGGATATTGTATAAATGGGTTAATTATGGACGAGGGTGGCGCCCACGGTGGTTTATTATGCATGATGGTGTTCTTTCTTATTATAAGATTCATGGACCAGATAAGATTGTGCTTAACCGTGAAGTTGAAAATGGGTTCAAGGTCATCGGAGAAGAGTCTCGCCGCCGTATCGCTGGCCAACGTCATGCTCTGTCTCGCCATTGTAAACCCGTCAGCGAAATCCACCTCATGGTTTGTTCCATAAGACAGAACAAGACAGATGAGAGGAGATTTTCTATATATACAGGCACAAAGAAGAGGCTGCATTTGAGGGCAGAGAGTGGAGAGGATAGGACAACATGGTTGGGTGCAATGTTAGCGGTAAAGGACATGTATCCTCGTTTACCCAATTCCGAGATTATGGCTCCTGTCGTATCTGTCGTTATTTCAACTGACAAGTTGAAACAACGACTTTTACAAGAGGGTTTGAGTGAGACTGCTATTAAGGAAAGTGAAGACATAATGAGAGCTGAGCTCTCTACATTGCATAAGTATATTGTTGCCCTCAAACAGAAGCAATTTATGCTAATTGATGCACTGCGCCATTTGGAGACGGATAAGGTTGACTTGGAGAACACAGTTGTTGAAGACCAAATTCAATCGAAGGAAGAAGGGGATTCCTTTCTATCAACCCATGAAAAATATAGCGCAGATGGAAGTGCTAGTGATTCTTCTGATGAGCATGATAGGCATGACCAATCTGATGATGAAGATGCATTTTTTGACACATCTGATATTCTTTCAACATGTTCATCTGACCACATGATGTCCTGCCATGAATCTGAAATCGAGGACGAGACTAATCCAAATAGTATACGTGATTCGATTTCGGCTGTCGTGCCGGTTGGATTTTACTATCCTAATATCAAGAGAAGAAATAAGTTGCCTGACCCTGTTGAGAAAGAGAATGGAATCAGTCTTTGGTCAATAATAAAAGATAACATTGGGAGGGATCTTACTAAAGTGTGTCTTCCAGTTTACTTCAATGAGCCTCTCTCCTCATTGCAGAAATGTTGTGAAGATCTTGAGTACTCTTACATTCTAGACCAAGCTTATGAATGGGGTAAAAGGGGTAACAGTTTTATGAGGATGCTACATGTAGCTGCATTTGCAGTTTCAGGGTATGCTAGCACTAGGGGTAGAAGTTGCAAACCATTTAACCCATTGTTGGGGGAAACGTATGAGGCAGATTATCCGGACAAAGGCATTCGGTTTATCTCGGAGAAGGTCAGTCATCACCCCATGATTGTTGCATGCCATTGTGAGGGGAATGGTTGGAAATTTTGGGGTGACAGCAATTTAAAAAGTAAATTTTGGGGTCGTTCAATTCAGCTCGATCCTGTTGGTATTTTGACTCTAGAATTCGACGATGGAGAAGTCTTTCATTGGAGTAAGGTAACAACATCCATTTACAACCTAATTTTAGGAAAGCTCTACTGCGAACATTATGGTACAATGCGGGTAGAGGGGAACCGTGAGTACACATGCAAGATTAAGTTCAAGGAGCAGTCAATCATAGATAGAAACCCTCACCAGGTTCATGGCATAGTGGAAGATAAGAAAGGCAAAAATGTAGGAACTATATTTGGGAAATGGGATGAGAGCCTGCATTACGTAATCGGAGGGAATTCGGATAAAGGAAAAGGGTCAAATGTGCCATCAAAACCAAATCTTCTATGGAAGCGAAGCCCGCCACCCGAGTACCAGACAAGATATAACCTTACACAGTTTGCTATCACACTAAATGAAATGACACCTGGTCTCAAGGAGAAGCTTCCACCGACGGATTCGAGGCTAAGACCTGATCAAAGGTGTCTAGAGAATGGAGAGTATCAAATGGCCAATGCTGAGAAATTGCGGCTGGAACAAAGACAGCGACAGGCGCGAAATATGCAAGAGAAGGGTTGGAAACCAAGGTGGTTTGCTAAGGATAAAGGTGGAAACACTTACCATTATGTTGGTGGATATTGGGAGACTAGGGATAAGGGGAATTGGGAATCTTGTCCTAACATTTTTGGCCAACATTCAACTGATAATGATCTTAACCCATCTCCATAA 2397 0.4401 MHSFRNQKTDNEPGSAPPPRTDRSNSSLSSELHHHHHYMPPSKPPSFRSLSSCSRSTRGTTPSSSSSSQQVQRSVSARFNRQNTTRGEVVLNDVVGNGISGILYKWVNYGRGWRPRWFIMHDGVLSYYKIHGPDKIVLNREVENGFKVIGEESRRRIAGQRHALSRHCKPVSEIHLMVCSIRQNKTDERRFSIYTGTKKRLHLRAESGEDRTTWLGAMLAVKDMYPRLPNSEIMAPVVSVVISTDKLKQRLLQEGLSETAIKESEDIMRAELSTLHKYIVALKQKQFMLIDALRHLETDKVDLENTVVEDQIQSKEEGDSFLSTHEKYSADGSASDSSDEHDRHDQSDDEDAFFDTSDILSTCSSDHMMSCHESEIEDETNPNSIRDSISAVVPVGFYYPNIKRRNKLPDPVEKENGISLWSIIKDNIGRDLTKVCLPVYFNEPLSSLQKCCEDLEYSYILDQAYEWGKRGNSFMRMLHVAAFAVSGYASTRGRSCKPFNPLLGETYEADYPDKGIRFISEKVSHHPMIVACHCEGNGWKFWGDSNLKSKFWGRSIQLDPVGILTLEFDDGEVFHWSKVTTSIYNLILGKLYCEHYGTMRVEGNREYTCKIKFKEQSIIDRNPHQVHGIVEDKKGKNVGTIFGKWDESLHYVIGGNSDKGKGSNVPSKPNLLWKRSPPPEYQTRYNLTQFAITLNEMTPGLKEKLPPTDSRLRPDQRCLENGEYQMANAEKLRLEQRQRQARNMQEKGWKPRWFAKDKGGNTYHYVGGYWETRDKGNWESCPNIFGQHSTDNDLNPSP 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0787 798 Gene3D - 505 671 - -
Lal17g0787 798 MobiDBLite consensus disorder prediction 332 350 - -
Lal17g0787 798 MobiDBLite consensus disorder prediction 1 80 - -
Lal17g0787 798 Gene3D - 716 781 - -
Lal17g0787 798 Gene3D - 97 225 IPR011993 -
Lal17g0787 798 MobiDBLite consensus disorder prediction 327 351 - -
Lal17g0787 798 SUPERFAMILY Oxysterol-binding protein-like 414 787 IPR037239 -
Lal17g0787 798 Pfam Pleckstrin homology domain 104 218 - -
Lal17g0787 798 ProSiteProfiles PH domain profile. 96 223 IPR001849 -
Lal17g0787 798 Pfam Oxysterol-binding protein 419 773 IPR000648 GO:0008289
Lal17g0787 798 SUPERFAMILY PH domain-like 99 229 - -
Lal17g0787 798 Coils Coil 724 747 - -
Lal17g0787 798 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 36 790 IPR000648 GO:0008289
Lal17g0787 798 MobiDBLite consensus disorder prediction 45 80 - -
Lal17g0787 798 MobiDBLite consensus disorder prediction 8 26 - -
Lal17g0787 798 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 36 790 - -
Lal17g0787 798 SMART PH_update 97 225 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0787 Lal-Chr17 5748590 5757476 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0787 K20456 - gmx:100781218 1180.24