Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0782 ATGGGAGGGGGTTCCATTTGGAAGATTGAATTTTTAGTATGGTTATCTCAAGTCATTGGTGGACTTTGTTCCAAGTCTTCCCAAGATGAAGAAAATGTTGTTGTTATGGATGCACATAAGAACTGGCAACATGGTTTCATAATTGCACCTCAAAGAATGGAGAGGAATGTGCAAATGCAGGAAGATAGTGATGAAGATGATTTGTATGATGGAATTCCAAGATTTACTGATTCCTTTCTTCACAAGTCTAGGTCTATAAAGTCAAGCCAAGTTGCTATTGCAAAGGTCTCAGAGGTGAGTTCACGCCTCAGCCGAGTTGGTACTGTTGGATTTGTGAAGGCTGTGGAGGTTTTGGACACTCTTGGGAGCAGCATGACAAATTTAAATGCTGCCAGTGGGTTTGTTTCTGGAGCTGCAATAAAGGGGAATGAAATTTCTATCTTAGCATTTGAGGTTGCAAACACAATTGTCAAAGGTTATAATCTTCTACAATCTCTTTCCCGGAAAAGTATTAGGCGTTTAAAAGAAGATGTGCTTCTTTCAGAGGGTATCCAAGATTTAGTATCAAATGATGTTGATGAACTTCTAAGGATTGTTGCTGCAGACAAGAGGCAGGAGTTGAAAGTTTTTTCGGATGAGGTCATTCGTTTCGGAAATCGTTCAAAGGATCCTCAATGGCACAACTTAGACCGTTACTTTGAGAAAATTAGCAGAGAATCAAATGCTCAAGGACCACCAAAGGATGAGATAGAATCAATAATGCATCAATTGGTGAATTTGGTTCAATATACAGCTGCATTATACCATGAACTACATGCTTTGGATAGATTTGAACAAGATTATGAGCGTGAGAGTGAAGAGGGGGATAAATGGAATGCAATTGAAAGAGGTAATAGCCTGGCATTCTTGAGGGTGGAAATTAAATGTCAAAAGAAGCAAATTAAATATTTAAAGAAAAAATCACTCTGGTCTAGAAGTCTGGAGGAGGTTATAGAGAAGCTTGTAGACATTGTCCATTTTTTGCATTTGGAGGTAGACAATGTGTTTGGTATTGCAGATGGCTACAAACCATTAATTGGACACATGAGTAGTAGCCAAAGATTGGGCCATGCAGGACTTGCTTTGCATTATGCAAACATAGTGCTCCAAATTGATATGCTTGTAGCCAGATCCAATTCCATGCCTGCAAATTCAAGGGATGCGTTATATCAAAGCTTGACTCCAAGTATAAAATCCGCTCTGCGTTCCGTATTACCATCCTTTCATGTTAGAGAAGAGCTAACTGTAGCAGATATCAAAGACGAGATACAGAAAACATTACATTGGCTAATTCCGATTTCCGCAAAAACAACCAAAGCACATCATGGTTTTGGTTGGGTAGGAGAGTGGGCAAACACAGACTCTGCAGCGGATAAGAAGACTTTGCGAAATAGTATAACGCGGATCGAAACATTCCACCATGCCGATAAAGACAAAGTAGAAAGTTACATTCTTCAACTTCTCTTATGGCTTCACTGCTTGGCCATTAAAAGTAAGGCCGGCGGCAATGCTGCCAATGTGAGGTCTGCTATCAAGTCCCCGGCCGGCGTTTCCTTGCAAAGGATAAACCAGCATTCTACAAATACACTATTACCATTGCTAACAATTGAAAAGCAAAACATGCTGCAGAAAGTAAGAAAGAAAAAGCAAATGAGAGGGATAAGTAAAAGCTTGGACTTAGACAATGTTAAGAGTAGATTGAAGGATAACATTAGATTGACCAAGAGCAAAAGTTTTTCATCAATAAGTAAAAGCAAGGAATTAACTTTTAATAAGATTTATTCTAAGCTTCATGTGATTGATTTTGGTATTGATAAAGATAGAGCATTGGATGTTATTGACAGATTAGATGTGGTTAGATAA 1902 0.3875 MGGGSIWKIEFLVWLSQVIGGLCSKSSQDEENVVVMDAHKNWQHGFIIAPQRMERNVQMQEDSDEDDLYDGIPRFTDSFLHKSRSIKSSQVAIAKVSEVSSRLSRVGTVGFVKAVEVLDTLGSSMTNLNAASGFVSGAAIKGNEISILAFEVANTIVKGYNLLQSLSRKSIRRLKEDVLLSEGIQDLVSNDVDELLRIVAADKRQELKVFSDEVIRFGNRSKDPQWHNLDRYFEKISRESNAQGPPKDEIESIMHQLVNLVQYTAALYHELHALDRFEQDYERESEEGDKWNAIERGNSLAFLRVEIKCQKKQIKYLKKKSLWSRSLEEVIEKLVDIVHFLHLEVDNVFGIADGYKPLIGHMSSSQRLGHAGLALHYANIVLQIDMLVARSNSMPANSRDALYQSLTPSIKSALRSVLPSFHVREELTVADIKDEIQKTLHWLIPISAKTTKAHHGFGWVGEWANTDSAADKKTLRNSITRIETFHHADKDKVESYILQLLLWLHCLAIKSKAGGNAANVRSAIKSPAGVSLQRINQHSTNTLLPLLTIEKQNMLQKVRKKKQMRGISKSLDLDNVKSRLKDNIRLTKSKSFSSISKSKELTFNKIYSKLHVIDFGIDKDRALDVIDRLDVVR 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0782 633 Pfam Protein of unknown function (DUF668) 367 452 IPR007700 GO:0045927
Lal17g0782 633 PANTHER DUF668 FAMILY PROTEIN 10 633 - -
Lal17g0782 633 Pfam Domain of unknown function (DUF3475) 147 203 IPR021864 GO:0045927
Lal17g0782 633 PANTHER OS01G0873900 PROTEIN 10 633 IPR045021 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0782 Lal-Chr17 5696167 5703658 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0782 - - gmx:100779607 767.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0782 17 5696167 5703658 Lal17g0782 17 5696167 5703658 ECH
Lal14g1403 14 15325592 15334687 Lal17g0782 17 5696167 5703658 PCT
Lal17g0782 17 5696167 5703658 Lal14g1403 14 15325592 15334687 PCT