Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0752 ATGTCTCCTATAATGAACTCATCATGTGTGGAAACTCTATTACAATACCACCCATCACAGCAACAACAACAACAACCCAAAGATGAGAATTCATCAGTTTTGTTTTTTGACTCAAATTTACTGCAAAAACAAGGTGAAGTACCCAAAGAGTTCCTTTGGTCATTAGGGGACATGGTTAGCACCACCCAAGAGGAGCTCAAAGAACCCCTCATTGACTTAGGAATCATGAAAAACAACGATGAGGAAGCTATTGCTATTGCTGCAAAGCATGTAAGAGAAGCATGCTTGAAACATGGTTTCTTTCAAGTTATCAACCATGGTGTGGATCAAAATCTCATACATGATGCTTATAATGAAACTGACACCATTTTTAAGCTACCCTTAAGCAAGAAGATGACTGCTAAGAGAAAACCTGGTGGGGTTTCAGGCTATTCAGGTGCTCATGCTGATCGTTATTCATCTAAGTTGCCATGGAAAGAGACATTTTCTTTTCAATACAATTACCAAAACAGTTCCAATACTCAGGTCATTGATTACTTCAAATCTGTGTTGGGTGAAGAACATCAACAAACTGGTTGGGTGTATGAAAAATACTGTGAAGCAATGAAGAGATTATCTTTAGTAATAACGGAGCTTTTGGCCATTAGTTTGGGTGTGGATCGATTGCATTATAAGAGTTTTTTTGAAGATGGTGATTCAATAATGAGATGCAACTATTATCCAACTTGCAAAAGTTGCAGCCTCACACTTGGCACTGGTTCTCACACAGATCCTACTTCACTAACTATTCTTCATCAAGACCAAGTTGGTGGTCTTGAAGTTTTCATTGATAATAAATGGCTAGGAGTTCGTCCTCGACCAGAAGCCTTAGTCATAAATATTGGTGACACTTTTATGGCATTATCAAATGGGAGATACAAAAGTTGCATGCACAGGGCATTGGTTAATGCAGAAAGGGAAAGAAGGTCATTGGTTTTTTTCCTGTGTCCAAGAAAAGACAAGACAATAAGGCCCCCAAATAATCTATTAACCAAAAAACAACCAAGAAAATATCCTGATTTCACATGGTCCAATTTGTTTGAGTTCACACAAAATCATTATAGAACTGATTCTGCTACACTCCAAAGCTTCTTTCACTGGCATTGCTCTTCTTCCACCATGCCTTCCAACTTCTAG 1176 0.3827 MSPIMNSSCVETLLQYHPSQQQQQQPKDENSSVLFFDSNLLQKQGEVPKEFLWSLGDMVSTTQEELKEPLIDLGIMKNNDEEAIAIAAKHVREACLKHGFFQVINHGVDQNLIHDAYNETDTIFKLPLSKKMTAKRKPGGVSGYSGAHADRYSSKLPWKETFSFQYNYQNSSNTQVIDYFKSVLGEEHQQTGWVYEKYCEAMKRLSLVITELLAISLGVDRLHYKSFFEDGDSIMRCNYYPTCKSCSLTLGTGSHTDPTSLTILHQDQVGGLEVFIDNKWLGVRPRPEALVINIGDTFMALSNGRYKSCMHRALVNAERERRSLVFFLCPRKDKTIRPPNNLLTKKQPRKYPDFTWSNLFEFTQNHYRTDSATLQSFFHWHCSSSTMPSNF 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0752 391 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 230 330 IPR005123 -
Lal17g0752 391 Pfam 2OG-Fe(II) oxygenase superfamily 232 330 IPR044861 -
Lal17g0752 391 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 27 384 - -
Lal17g0752 391 PANTHER GIBBERELLIN 20 OXIDASE 1-B-LIKE 27 384 - -
Lal17g0752 391 Pfam non-haem dioxygenase in morphine synthesis N-terminal 69 172 IPR026992 -
Lal17g0752 391 Gene3D - 38 362 IPR027443 -
Lal17g0752 391 PRINTS Isopenicillin N synthase signature 91 108 - -
Lal17g0752 391 PRINTS Isopenicillin N synthase signature 255 276 - -
Lal17g0752 391 PRINTS Isopenicillin N synthase signature 290 316 - -
Lal17g0752 391 SUPERFAMILY Clavaminate synthase-like 39 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0752 Lal-Chr17 5380928 5385434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0752 65 368 Glycosyltransferase AT5G59530 29.430 3.87e-30 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0752 K05282 - gmx:100816834 587.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0752 17 5380928 5385434 Lal17g0752 17 5380928 5385434 ECH