Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0741 ATGGAACGCAACAACAACAATCCGAATCGAAACCCTAACCCGATTCGGAACCCGCTGTCATCATCGGTGCCCGTTTGGCCAACGATCGATGGAGCATTGGGATTGACGGAGGAAGATTCATTGAGCTACGCTCGCAATTTCTACAACTTCGGATTCGCACTTCTTCCTCTTCTTTGGGCCGTCAATTGCTTCTACTTCTGGCCCGTTCTCCGCCACTCCCGCTCTTTCCCTCATATTCGCCCCTATGTTGTTGGGTCAGCAATTGGTTTAACTGTGTTCACCGCTCTTCTCTGTTCCTGGGCGCTAACGTTTTCCATTGGAGGGGAACGCCTCTTTGGACCTGTTTGGGATCAATTAGTTATGTACAATCTTGCTGATAGGCTAGGCTTAACAACCTGGAGCTAG 405 0.4988 MERNNNNPNRNPNPIRNPLSSSVPVWPTIDGALGLTEEDSLSYARNFYNFGFALLPLLWAVNCFYFWPVLRHSRSFPHIRPYVVGSAIGLTVFTALLCSWALTFSIGGERLFGPVWDQLVMYNLADRLGLTTWS 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0741 134 PANTHER GAMMA-SECRETASE SUBUNIT PEN-2 7 134 IPR019379 -
Lal17g0741 134 Pfam Presenilin enhancer-2 subunit of gamma secretase 37 124 IPR019379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0741 Lal-Chr17 5283423 5287134 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0741 K06170 - gmx:106798930 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0741 17 5283423 5287134 Lal4g0632 4 4693721 4695007 LSH