Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0740 ATGAAACCTTCTTCTGTTAATGACATGGAAAATGGAAAGTTGGATAATAATAGAGAGAAGATTCCAAAAAGTAATAGTAGCAGGGTAGTTAAAATTCATAATCAAGCCTTATTGTCTGGACTTGCATATTGCATCTCCTCTTGTAGCATGATATTAGTCAACAAGTTTGTACTTTCCAGCTATGATTTTAATGCTGGCATATCCTTGATGTTGTACCAGAATTTGATTTCAGTGTCTATTGTTTCTATATTGAGCCTTTCGGGTTTAATTTCAACCGAACCACTGACATGGAGATTGATTAAAGTCTGGTTGCCAGTGAATGTTATATTTGTTGGAATGCTCATTACAAGCATGTTTAGTTTGAAATACATTAATGTAGCTATGGTGACAGTTCTAAAGAATGTTACTAATGTCATAACCGCCCTTGGTGAAATGTACTTGTTCAAGAAGCACCACGACGGCAAAGTTTGGACTGCTCTGTTTCTAATGATTATTTCAGCAATAACTGGAGGGATCACTGATCTCGCTTTTAATGCAACTGGTTATGCTTGGCAGACACTAAATTGTTTCTTAACTGCATCATATTCTCTGACCTTGCGGAGGGTCATGGATACGGCAAAGCAAGTTACCAAATCTGGAAATTTAAATGAGTTTTCGATGGTCTTGTTAAACAACGCCCTTTCTCTGCCTTTGGGAATTTTCTTGGTCATTGTTTTCAACGAGGTGGATTATCTCTTAAGAACGCCACTTCTGAGATTTCCTAGCTTTTGGATGGTGATGACTTTCAGTGGATTTTTGGGCCTAGCAATCAGCTTCACATCCATGTGGTTTCTTCATCAGACAGGGGCTACGACTTACAGCCTAGTAGGTTCTCTGAATAAGATCCCACTTTCAGTTGCTGGCATCTTTCTCTTTAAAGTTCCGACTAGTTTGCAGAACTCCGCTAGCATTTTCTTCGGTCTTCTAGCAGGAGTGTTTTTTGCCAGAGCCAAAATCCGGGAGAAATCTTAA 1011 0.3887 MKPSSVNDMENGKLDNNREKIPKSNSSRVVKIHNQALLSGLAYCISSCSMILVNKFVLSSYDFNAGISLMLYQNLISVSIVSILSLSGLISTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITALGEMYLFKKHHDGKVWTALFLMIISAITGGITDLAFNATGYAWQTLNCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNALSLPLGIFLVIVFNEVDYLLRTPLLRFPSFWMVMTFSGFLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSVAGIFLFKVPTSLQNSASIFFGLLAGVFFARAKIREKS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0740 336 Pfam Triose-phosphate Transporter family 38 326 IPR004853 -
Lal17g0740 336 MobiDBLite consensus disorder prediction 1 21 - -
Lal17g0740 336 PANTHER GDP-MANNOSE TRANSPORTER 1-RELATED 20 332 IPR038736 GO:0005458
Lal17g0740 336 PANTHER SOLUTE CARRIER FAMILY 35 20 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0740 Lal-Chr17 5277480 5282683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0740 8 286 Organic Solute Cotransporters AT2G13650 79.004 1.98e-151 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0740 K15356 - gmx:100808480 570.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0740 17 5277480 5282683 Lal17g0740 17 5277480 5282683 ECH
Lal17g0740 17 5277480 5282683 Lal4g0631 4 4687293 4692433 LSH