Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0737 ATGTTACCTTTGCCGTTTTCTCTATACAAGGAAACGACGACGTCGACCACCACCACCATCTCCAAAACGACGTCGTTTTGGAAGAAGCTGCGGTTTGTCTCAATTTCCACCTTAGGGGTTGATGATGGTAGATTGAGGATGGTGAGGCTTTTGGGGTTGGCTCGTGGGGAGGTTGAGGAACCCCGGGAAATTACCTCGAGGTCCAATCTGACCAGTGATTCAAGTGAAAATGGGTGGCTTATCAGGTTCTTTGACTCGTCGTTCTTTTGCGAGTGGATTGCTGTTAGTTACTTGTACAAGCATGATCACGCCGGGGTGCGTGATTATCTTTGTAATAGAATGTATACACTTCCCTTGCATGGGATTGAGAGTTACTTGTTCCAAGTGTGTTACATGATGATACACAAGCCGAGCCCGTCTTTGGATAAGTTTGTCATAGATGTGTGCTGTAAGTCACTTAAGATTGCTTTGAAGGTGCATTGGTTCGTATTGGCGGAGCTTGAGGACTCTGATGATAATGATGGGATTAATAGGATTCAGGAGAAGTGCCAGATTGCTGCCACTTTGATGGGTGAGTGGCCGCCTCTAATTCGGCCTCAGAGTGCAGCTTCAAGCCCTGGAGGAAAGAACCAAGTTTTGAATAAGATACTGTCATCCAAACAGCGTTTGTTGTCACTGACATCTTCGCCGTCTCCTCAGAAGTCTTTGTCGTTCTCGCCTTCTTCAGGAAACAACTTGCAGTACGATTGTAGTTCACAGTCTCCTGATGAGAACAAGTTATTTAAGAAATTTATGCCGGGTGCAAAGGTTAGAGATGCTTTACTTTTTAGGAAGTCGGTGGAGAAAGATGACGATGATTCTGAAAAGGATGGTTTTTTCAAGAAGCTTTTAAGAGATAGCAAAGGTGACGATGAGTTGGGCCAGAAAATTCGAGATGCATTTCTCTTTCGAAAGCCATCTGAGAAATATGACGATGACTCAGAAAAGGATAATTTCTTTAAAAGGCTGTTAAGGGACAGTAGAGGTGATGATGAAGATTCTGAAAAGGATGGTTTCTTTAAAAGGCTCTTAAGGGACAATAAAGGTGAGGATGAGGATTTGGCCTCAAGTTCAGAGGGTTTTTTTAAGAGATTGTTTCGTGATAACAAGAATGATTCTGAGGATAAAACACACACAAAAACTATTGATGATGAAGAAAAAGAGGGATTTTTCCGGAAGTTTTTCAGAGAGAAATTGGATGATAAGAAGGATGGCAATGATGAAGGAAATGTTACTCGTTCTGATGAGAAATGTGCAAAGATTGCTGAAGAGGATGTAAAAGATGGGTTTTTCCGGAAATTATTTAAGGATAAATCCGAGGACAAGAAAGATGCTAATGATAAAATTGAAGAAGGTACTGCCAATGCTGAGGAAGAAGAGCCTTCTGATTTTTCTTTATTCAAAAGACTATTTCGTGTGCACCCTGAAGAGGGTAAAAGTAGTCCAGCCAATGAAAACAATAATGCTGGCTTGTTTGAAAGTAGTCCAGGTACAGAGAATTTTTTCCGCAAATTGTTTAGAGACCGTGACCGTTCGATTGAAGATTCAGAGCTATTGGGGTCAAAGAAGCAGAAAGAGAAGCATCCCGGATCACCAAAACAACAAAATGAGAAATCAGGACCAAAGCCCCCACTTCCATTTAGTCTGTTGCAGTTTCGGAAAGGAGCTTACCACGAGTCACTGGATTTTGTGCTGTCATTATGTGAAACTTCATTTGGGTTAGTGGATGTATTTCCAACTGAAGACCGCAAGCATGCTCTGAACGAGTCACTTGCAGAGATCAATTTACATTTAATTGAGGCTCAAAATACTGGAGGAGTTTGTTTTCCATTGGGAAAGGGCATGTATCGCGTGCTTCATATACCTGAAGATGAAGCTGTTCTCTTGAATTCTAGGGAGAAGGCTCCTTACCTGATATGTGTTGAAGTTTTGAAATGTGAAATGCCAAGCAATTTCAAGGAGACATCCAGTTCTCAGAAACTGTCTAAAGGTGGAATTCCCTTGGCAAATGGAGATGCTTTCTTACAAAAACCACCCTCTTGGGCTTATCCTTTATGGACAGCACAAGAGGTGTATCGTAATAGCAATGATAGGATGTCCCAATCAACTGCTCAGGCAATTGACCAGGCAATGACCCATGTATCTGAGGCAAAAGCCAAAATTGTTAGTTTAAATCTTTCTGTGGAAGCACAATTACATGGTCACCTTGAGAAGAGTGAAGTGGATCTACATGTTGGCAGTCGGCATTCGAATTCAATTTATAGAGAGGGTGTAAGAGAAATGGCAAGACCAAGACATGAAAATGATCTGGAGTGGGTACGGGTAGTGTTGACAGCCGATCCTGGGGTTAGAATGGAAGATATTGAGAATCCAGCACCACGACGCCGGAAGGAACATCGTCGTGTTCCAAGTACAGTGGCAATAGAGGAAGTAAAGGCTGCGGCAGCAAAAGGAGAAGCACCTCTTGGACTCCCTTTGAAAGGTGCTGGGCAAGATTCATCAGATGCACAACCAAGGGCTGATGGAATTACTCCCAAAGCCAGTGATGCCTTGTCTGGTGAACTTTGGGAGGCAAAGAAAGAGAGGATACGCAAGGCTTCCATACATGGGAATTTACCTGGTTGGGACTTGCGATCTGTTATTGTGAAGAGTGGTGATGATTGCAGGCAGGAGCATCTGGCAGTTCAGCTTATTTCACACTTCTATGATATTTTCCAAGAAGCTGGTCTACCACTTTGGCTGCGCCCTTATGAAGTTTTATGTACTTCTTCTTACACAGCTCTTATTGAAACAATTCCAGATACGGCTTCTCTACATTCTATCAAGAGTAGATATTCCAACATCTCAAGTTTACGTGATTTCTTTATTGCCAAGTATCAAAAAGATTCTCCGAGTTTTAAACTTGCACAGAGGAACTTTGTTGAGAGTATGGCTGGATATTCCTTGGTTTGCTACCTTCTTCAGGTGAAGGATAGGCACAATGGGAACCTCTTAATGGATGAAGAAGGCCATATTATACATATTGATTTTGGCTTTATGCTTTCCAACTCACCTGGTGGAGTTAATTTCGAAAGTGCACCTTTCAAATTGACCCGAGAGCTACTTGAGGTCATGGATTCTGATGCTGAGGGCATTCCGAGCGAATTCTTTGATTATTTCAAGGTTTTATGCATTCAAGGCTTCCTTACTTGCCGTAAGCATGCTGAGCGCATTATTCTTCTTGTTGAGATGTTGCAGGACTCAGGTTTCCCCTGCTTTAAAGGTGGCCCACGGACAATACAGAACTTACGAAAGCGGTTCCATCTCGGTTTAACAGAAGAGCAATGTGTATCTTTGGTTCTTTCGCTTATTAGCAGCAGCTTGGATGCATGGAGGACACGACAGTATGATTATTACCAAAAAGTTTTGAATGGAATATTGTGA 3462 0.4237 MLPLPFSLYKETTTSTTTTISKTTSFWKKLRFVSISTLGVDDGRLRMVRLLGLARGEVEEPREITSRSNLTSDSSENGWLIRFFDSSFFCEWIAVSYLYKHDHAGVRDYLCNRMYTLPLHGIESYLFQVCYMMIHKPSPSLDKFVIDVCCKSLKIALKVHWFVLAELEDSDDNDGINRIQEKCQIAATLMGEWPPLIRPQSAASSPGGKNQVLNKILSSKQRLLSLTSSPSPQKSLSFSPSSGNNLQYDCSSQSPDENKLFKKFMPGAKVRDALLFRKSVEKDDDDSEKDGFFKKLLRDSKGDDELGQKIRDAFLFRKPSEKYDDDSEKDNFFKRLLRDSRGDDEDSEKDGFFKRLLRDNKGEDEDLASSSEGFFKRLFRDNKNDSEDKTHTKTIDDEEKEGFFRKFFREKLDDKKDGNDEGNVTRSDEKCAKIAEEDVKDGFFRKLFKDKSEDKKDANDKIEEGTANAEEEEPSDFSLFKRLFRVHPEEGKSSPANENNNAGLFESSPGTENFFRKLFRDRDRSIEDSELLGSKKQKEKHPGSPKQQNEKSGPKPPLPFSLLQFRKGAYHESLDFVLSLCETSFGLVDVFPTEDRKHALNESLAEINLHLIEAQNTGGVCFPLGKGMYRVLHIPEDEAVLLNSREKAPYLICVEVLKCEMPSNFKETSSSQKLSKGGIPLANGDAFLQKPPSWAYPLWTAQEVYRNSNDRMSQSTAQAIDQAMTHVSEAKAKIVSLNLSVEAQLHGHLEKSEVDLHVGSRHSNSIYREGVREMARPRHENDLEWVRVVLTADPGVRMEDIENPAPRRRKEHRRVPSTVAIEEVKAAAAKGEAPLGLPLKGAGQDSSDAQPRADGITPKASDALSGELWEAKKERIRKASIHGNLPGWDLRSVIVKSGDDCRQEHLAVQLISHFYDIFQEAGLPLWLRPYEVLCTSSYTALIETIPDTASLHSIKSRYSNISSLRDFFIAKYQKDSPSFKLAQRNFVESMAGYSLVCYLLQVKDRHNGNLLMDEEGHIIHIDFGFMLSNSPGGVNFESAPFKLTRELLEVMDSDAEGIPSEFFDYFKVLCIQGFLTCRKHAERIILLVEMLQDSGFPCFKGGPRTIQNLRKRFHLGLTEEQCVSLVLSLISSSLDAWRTRQYDYYQKVLNGIL 1153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0737 1153 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 2. 989 1009 IPR018936 GO:0016301
Lal17g0737 1153 MobiDBLite consensus disorder prediction 835 860 - -
Lal17g0737 1153 MobiDBLite consensus disorder prediction 489 509 - -
Lal17g0737 1153 MobiDBLite consensus disorder prediction 452 474 - -
Lal17g0737 1153 PANTHER BNAA02G34040D PROTEIN 308 377 - -
Lal17g0737 1153 PANTHER BNAA02G34040D PROTEIN 370 1153 - -
Lal17g0737 1153 PANTHER BNAA02G34040D PROTEIN 47 304 - -
Lal17g0737 1153 SUPERFAMILY ARM repeat 100 172 IPR016024 -
Lal17g0737 1153 SMART pi3k_hr1_6 892 1151 IPR000403 -
Lal17g0737 1153 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 895 909 IPR018936 GO:0016301
Lal17g0737 1153 Gene3D - 950 1151 IPR036940 GO:0016301
Lal17g0737 1153 CDD PI4Kc_III_beta 861 1153 - -
Lal17g0737 1153 SUPERFAMILY Protein kinase-like (PK-like) 618 1147 IPR011009 -
Lal17g0737 1153 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 870 1138 IPR000403 -
Lal17g0737 1153 MobiDBLite consensus disorder prediction 529 558 - -
Lal17g0737 1153 Pfam Phosphatidylinositol 3- and 4-kinase 892 1099 IPR000403 -
Lal17g0737 1153 MobiDBLite consensus disorder prediction 529 546 - -
Lal17g0737 1153 Gene3D - 762 945 - -
Lal17g0737 1153 Gene3D - 85 192 IPR042236 -
Lal17g0737 1153 MobiDBLite consensus disorder prediction 493 508 - -
Lal17g0737 1153 MobiDBLite consensus disorder prediction 226 253 - -
Lal17g0737 1153 ProSiteProfiles PIK helical domain profile. 1 186 IPR001263 -
Lal17g0737 1153 PANTHER PHOSPHATIDYLINOSITOL KINASE 370 1153 IPR015433 GO:0046854|GO:0048015
Lal17g0737 1153 PANTHER PHOSPHATIDYLINOSITOL KINASE 308 377 IPR015433 GO:0046854|GO:0048015
Lal17g0737 1153 PANTHER PHOSPHATIDYLINOSITOL KINASE 47 304 IPR015433 GO:0046854|GO:0048015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0737 Lal-Chr17 5240450 5253138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0737 45 1152 Lipid Metabolism Gene Families AT5G09350 69.588 0.0 1528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0737 K19801 - gmx:100781715 1882.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0737 17 5240450 5253138 Lal17g0737 17 5240450 5253138 ECH
Lal19g0945 19 13453042 13466142 Lal17g0737 17 5240450 5253138 PCT
Lal17g0737 17 5240450 5253138 Lal19g0945 19 13453042 13466142 PCT