Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0735 ATGGTAAATAGATCCACGAACTCTAACATCCTCTCTTCCGCATCTAGATTCCGTGTTAGGAAATTCTCTCCCAGCGCCATCACTCTCTATACACTTTTCATTTTCGCTTTCTCCATTTTCCTCTTCTTCTTCTACCTAAGGAATCTCATCCTCGTTCAAGATCAAGATTCGCCAACTCTCCCTTCGTTCTCTCTACAATCCCGATCGCATCAGGTGCCAGAGTTACATGTTTATGATAAGCAACTTTGGGATTCTCCTTTCAGCCATGGCTTACGCTCATGTGTGAAGCCTACTTCCAAATATAAAGGTGCACAAGGATTTGATCGCTATCTGACAGTGAGAAGTAATGGTGGACTAAATCAAATGCGAACTGGTATATCAGACATGGTGGCTGTCGCATATATAATGAATGCAACTTTAGTCATCCCTCAGTTGGATAAACGTTCGTTCTGGCAAGACACAAGTGTATTTTCAGATATATTTGATGAGCTTCATTTTATTGAATCCCTGAGAGGAGATATCAGGGTTGTCAAGGAACTTCCCAAGAACTTGGAAGCTGTCCCCCGGGCCAGGAAGCACTTTACTTCCTGGTCTAGTGTGGGTTACTATAGAGAGATGACAAGTCTATGGAATGAGTACCAGGTGATTCATGTTGCAAAATCAGATTCTCGACTTGCAAACAATGATCTTCCTTTGGATATCCAGAGGTTGAGATGCCGTGCAATGTATCGTGCACTTCAATTTTCTCCTCCTATTGAGAATTTAGGAAAGAGATTGGTGGATCGGCTGAGATCACGTGGGGAACGATATATTGCTCTTCATCTGAGATATGAGAAGGATATGCTCTCTTTTACTGGTTGCACATATGGTTTGACGGATGCAGAATCTGAGGAGCTGAGAATTTTGAGGGAGAATACAAATCATTGGAAAGTAAAAGACATAGATTCAACAGAACAAAGACTTGGAGGATTTTGTCCACTGACTCCAAAGGAGGTTGGCATTTTTCTTCAGGCTCTTGGGTTTCCCCCGTCGACATCAATTTACATTGCAGCAGGGGAGATCTATGGTGGCAATACTCATCTTTCAGAGCTCTCCTCACGCTTCCCTAATCTAATCTTTAAGGAATCCCTTGCAAGCCCTGAAGAGCTCAAAGCTTTCATCAATCATGCATCTCAAAGTGCCGCGCTCGATTATATAATCTCTGTAGAGAGTGATGTGTTTGTTCCGTCATATTCAGGAAATATGGCAAGAGCTGTTGAGGGGCACCGCAGGTTCTTAGGTCACCGGAAAACTATCAATCCAGACAGGAAAGGACTTGTTGAAAATTTTGATAAGCTGGTAACTGGAGAGCTAGAGGAAGGAGTCACACTGTCACATCTAGTGCAGCGGATGCACAAGAATAGGCAAGGAGCTCCAAGGAAAAGACATGGTTCCCTACCAGGTCTTAAAGGCAAAGCACGTTTAAGGACTGAAGAATCCTTTTATGAAAATCCATACCCTGAGTGTATATGTAGTTCTGATACACCTGTATCTAACAATGAAGAAGAAGGAGAAGATGTTGAGGCCTCTCAGTTATTCGAGAAACTGAAAGAGGCTGAAAGGAAACGGATAAATGAATTGGAAGAACTAGACAACAAGGCTAATGTGCAGTTAGAGAGGCAGCTTGTCATGGCTTCTTCATGGAGCAGAGCTTTGTTGACCTTGCGTGGGAAACTCAAGGGAACAGAGTGGGACCCTGAAAATTCACACAGGATAGACTTCAGCGATTTTTTGAGACTTCTTGACTCAAATAATGTCCAGTTTATGGAGTACTCAAATTATGGTCAAACAATATCAGTGATTCTGCCATATTACAAAAATGGGAAAACATCAGGAAGCGAAGGAAATTCTAAGGATATTGTATTTCGGCGTCATCCGGTTGATCGAATGCCAATTGATTCTTGGAATGATGTTTGGGGAAAGCTGCATCAGCAAATTGTAAATGTAGATGTCATTAATGTGGACAGTGTACCCGCTGAAGTATACTCAACCGTTGCAACTGCAGTTATATGGTCTATGCGTCTTGCCCTGGCTGTTGGTTTTTATGTGTGGATTGATAACTTGATGAGACCAATATATGCAAAGTTGATACCTTGTGATTTGGGAACTCCTACTCAAGAAACTAGATTGCCACTAAAACGCCAGTCACTAGGGTCTCTAGGAAAAAGTCGGGCTAAATTTATATCTGCAGAAGAAAGAACTGGTGTTACATTTGATGATTTTGCTGGCCAGGAATATATAAAGAGGGAACTACTAGAGATTGTCCGAATTTTAAAAAATGATGAGGAGTTTCAAGACCAAGGAATTTATAGTCCAAAAGGTGTACTTCTACATGGGCCTCCTGGAACTGGTAAAACTCTACTGGCTAAGGCCATCGCTGGTGAAGCAGGGTTGCCTTTCTTTGCTGCAAATGGCACTGACTTTGTAGAGATGTTTGTAGGGGTTGCTGCATCCCGTGTTAAAGACCTCTTTGCTAATGCAAGATCCTTTGCACCTTCTATCATCTTTATTGATGAGATAGATGCTATTGGTAGCAAGCGTGGAGGACCTGATATTGGCGGAGGGGGTGCTGAGAGGGAACAAGGCTTACTTCAGATACTGACTGAGTTGGATGGATTCAAAGTTTCTACAGCTCAGGTGCTTGTGATAGGTGCTACAAATAGATTGGATATTCTTGATCCTGCTTTATTGAGGAAAGGCCGTTTTGACAAGATCATCAGAGTTGGTTTGCCATCAAAAGATGGAAGATTTGCCATTTTGAAGGTGCATGCGAGGAATAAATATTTCCGCTCAGAGGAGGAAAAGGATATTTTACTCAAGGAAATTGCAGAGCTTACAGAAGATTTTACTGGGGCAGAGCTTCAAAATATACTGAATGAAGCTGGAATTTTGACAGCCAGGAAGGATTTGGACTACATTGGGAGAGATGAGCTACATGAGGCATTAAAAAGGCAAAAGGGAACGTTTGAAACAGGGCAAGAGGATAGTACTGCAATTCCTGAAGATTTGAAATTGAGATTGGCATACCGAGAGGCAGCAGTTGCTGTTCTTGCTTGTTATTTTCCTGAGCCCCACCGTCCTTTTGTTGAGACTGATATAAATTCTATCCGCAGCCAGCCGAATATGCGTTATACTGAAATTTCTGGTCAGGTTTTTGCAAGGAAATTGGATTACATAAACTCTATAGTGCGTGCTTGTGCTCCAAGAGTAATTGAGGAGGAGATGTTTGGGATTGACAACTTGTGTTGGATCTCTGCAAAGGCAACATTAGAAGCTTCAAGACGTGCTGAATTTTTAATTCTGCAGACAGGAATGACTGCATTTGGGAAGGCATACTACAAAAACCACAGTGATCTTGTGCCTAATCTTGTAATGAAGCTTGAAGCACTCCGAGATGAGTATATGCGTTATGCTACAGAGAAGTGTTCATCTGTGCTAAATGAATACCAGTCAGCGGTTGAGACAATCACAGATATTTTGCTTGAAAAGGGGGAAATTAAAGCTGAGGAAATTTGGGAGATTTATAAGAATTCTCCCCGTCTAGCCCAGCCTTCTGTTAGTCCACTTGATGAGTATGGAGCACTAATTTATGCCGGGCGGTGGGGAATCCATGGGATCAGCCTTCCAGGAAGGGTTACATTTGCACCGGGCAATGTTGGATTTTCGACCTTTGGTGCACCCCGCCCTACAGAGACACAAATTGTTAGTGATGAAACTTGGAAACTAGTAGATCATATTTGGGATAAAAAGCTTGAAGATATTAGAGAAGATGCTTCAAGGGTGATTGAAGAAGAGAAACAAAAGCCACAACTTTTGATGGCAAGCCATTTCCTTTGA 3876 0.4221 MVNRSTNSNILSSASRFRVRKFSPSAITLYTLFIFAFSIFLFFFYLRNLILVQDQDSPTLPSFSLQSRSHQVPELHVYDKQLWDSPFSHGLRSCVKPTSKYKGAQGFDRYLTVRSNGGLNQMRTGISDMVAVAYIMNATLVIPQLDKRSFWQDTSVFSDIFDELHFIESLRGDIRVVKELPKNLEAVPRARKHFTSWSSVGYYREMTSLWNEYQVIHVAKSDSRLANNDLPLDIQRLRCRAMYRALQFSPPIENLGKRLVDRLRSRGERYIALHLRYEKDMLSFTGCTYGLTDAESEELRILRENTNHWKVKDIDSTEQRLGGFCPLTPKEVGIFLQALGFPPSTSIYIAAGEIYGGNTHLSELSSRFPNLIFKESLASPEELKAFINHASQSAALDYIISVESDVFVPSYSGNMARAVEGHRRFLGHRKTINPDRKGLVENFDKLVTGELEEGVTLSHLVQRMHKNRQGAPRKRHGSLPGLKGKARLRTEESFYENPYPECICSSDTPVSNNEEEGEDVEASQLFEKLKEAERKRINELEELDNKANVQLERQLVMASSWSRALLTLRGKLKGTEWDPENSHRIDFSDFLRLLDSNNVQFMEYSNYGQTISVILPYYKNGKTSGSEGNSKDIVFRRHPVDRMPIDSWNDVWGKLHQQIVNVDVINVDSVPAEVYSTVATAVIWSMRLALAVGFYVWIDNLMRPIYAKLIPCDLGTPTQETRLPLKRQSLGSLGKSRAKFISAEERTGVTFDDFAGQEYIKRELLEIVRILKNDEEFQDQGIYSPKGVLLHGPPGTGKTLLAKAIAGEAGLPFFAANGTDFVEMFVGVAASRVKDLFANARSFAPSIIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTELDGFKVSTAQVLVIGATNRLDILDPALLRKGRFDKIIRVGLPSKDGRFAILKVHARNKYFRSEEEKDILLKEIAELTEDFTGAELQNILNEAGILTARKDLDYIGRDELHEALKRQKGTFETGQEDSTAIPEDLKLRLAYREAAVAVLACYFPEPHRPFVETDINSIRSQPNMRYTEISGQVFARKLDYINSIVRACAPRVIEEEMFGIDNLCWISAKATLEASRRAEFLILQTGMTAFGKAYYKNHSDLVPNLVMKLEALRDEYMRYATEKCSSVLNEYQSAVETITDILLEKGEIKAEEIWEIYKNSPRLAQPSVSPLDEYGALIYAGRWGIHGISLPGRVTFAPGNVGFSTFGAPRPTETQIVSDETWKLVDHIWDKKLEDIREDASRVIEEEKQKPQLLMASHFL 1291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0735 1291 CDD O-FucT_plant 110 431 IPR024709 -
Lal17g0735 1291 Pfam AAA+ lid domain 949 992 IPR041569 -
Lal17g0735 1291 PANTHER INACTIVE ATP-DEPENDENT ZINC METALLOPROTEASE FTSHI 4, CHLOROPLASTIC-RELATED 510 1260 - -
Lal17g0735 1291 Coils Coil 522 550 - -
Lal17g0735 1291 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 744 997 IPR027417 -
Lal17g0735 1291 CDD AAA 755 923 - -
Lal17g0735 1291 PANTHER METALLOPROTEASE M41 FTSH 510 1260 - -
Lal17g0735 1291 SUPERFAMILY FtsH protease domain-like 1012 1193 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Lal17g0735 1291 SMART AAA_5 784 925 IPR003593 -
Lal17g0735 1291 Pfam GDP-fucose protein O-fucosyltransferase 110 425 IPR019378 -
Lal17g0735 1291 Gene3D - 924 1004 - -
Lal17g0735 1291 ProSitePatterns AAA-protein family signature. 893 911 IPR003960 GO:0005524|GO:0016887
Lal17g0735 1291 Coils Coil 941 961 - -
Lal17g0735 1291 Pfam ATPase family associated with various cellular activities (AAA) 788 922 IPR003959 GO:0005524|GO:0016887
Lal17g0735 1291 Gene3D Peptidase M41 1006 1193 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Lal17g0735 1291 Gene3D - 732 922 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0735 Lal-Chr17 5210095 5227174 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0735 78 507 Miscellaneous Gene Families AT1G22460 59.629 7.30e-179 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0735 - - gmx:100804743 1413.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0084 21 580210 591194 Lal17g0735 17 5210095 5227174 ECH
Lal17g0735 17 5210095 5227174 Lal17g0735 17 5210095 5227174 ECH