Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0734 ATGACTACTAACATCTTTTTGTTCCTCCTCTTTCTACTACACCCTCAACCACATACCTTTGTAAATGGAGATGCAACATTGATCAAAAAAACATGCAAGAACACCAAGTACTACAATCTATGCTTCTCTTCCCTCAAATCAGACCCAAGTAGCCCTAATGCAGACCCTAAGGGCCTAGCAGTTATCATGGTTGGGATTGGAATGACAAATGCTACTTCCACTTCTTCATACTTGTCTTCAAAATCCCTTGTTCAAACTAACAACACAACCTTAAACAGTGTCCTAAAAGAGTGTGCAGATAAGTATAACTATGCTGGTGATGCCCTTCAAGCTTCTGTTCAAGATTTGGCTAATGAGGAATATGACTATGCTTATCTTCATATAATTGCAGCTAAAGATTACCCAAATGCTTGTCACAATGCTTTCAAAAGGTACCATGGTTTGGTTTATCCTACAGAGCTAGCTAGTAGAGAAAATGGGTTGAAGCATATATGTGAAGTTGCAATGGGTATCATTGATAATCTCATTAATCTCAATTCGTAG 543 0.3812 MTTNIFLFLLFLLHPQPHTFVNGDATLIKKTCKNTKYYNLCFSSLKSDPSSPNADPKGLAVIMVGIGMTNATSTSSYLSSKSLVQTNNTTLNSVLKECADKYNYAGDALQASVQDLANEEYDYAYLHIIAAKDYPNACHNAFKRYHGLVYPTELASRENGLKHICEVAMGIIDNLINLNS 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0734 180 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 176 IPR035513 -
Lal17g0734 180 TIGRFAM PME_inhib: pectinesterase inhibitor domain 4 175 IPR006501 GO:0004857
Lal17g0734 180 PANTHER CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 2 9 175 - -
Lal17g0734 180 CDD PMEI_like 32 174 - -
Lal17g0734 180 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 25 175 IPR035513 -
Lal17g0734 180 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 175 - -
Lal17g0734 180 Pfam Plant invertase/pectin methylesterase inhibitor 27 170 IPR006501 GO:0004857
Lal17g0734 180 SMART PMEI_2 23 171 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0734 Lal-Chr17 5201337 5201879 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0734 - - gmx:100306461 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0734 17 5201337 5201879 Lal17g0734 17 5201337 5201879 ECH