Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0730 ATGAGAGGAACAATGGGTACTTCTCCTCATGCAGTTGAAGCTCGACACCGTTTACCAGCATCTATTGAAGATTTATACAAACGACGACTCTCAAAAAGTAAAGGAAAAGATATAGAGAAGCCTTTCCACTTATCTAGTACCCAAGATAGGATCTCAACAAGATGCAAGTTTTCTTTCTTGAAACTTATCTTATTGATAACCATTTGTGGCACTTTCATTATGCTTCTGTACTCTCCAGTGGTTTACAATACCAATCACTTATCAAGTTCTGGCTCTAGATGGATATGGGGTAGCGAAGATCCTCGGTACACATCGAATGTAGATATCGACTGGAACGACATATCGAAAATTACTAAGAAGCTTACAGGGAAAAATGATTTTCAAGGGATAGGCCTTCTAAATTTCAACAAGACAGAAATAGGTCATTGGGAGCATGTTATTCCTGATGCAACACATGTTGTTCTTCACATGGACTTTGCTGCAAAGAATGTAACATGGGAGTCATTGTACCCTGAATGGATTGATGAGGAAGAAGAAACTGAAGTTCCTGTTTGCCCTTCTCTACCTAGTCTTCGATCTCCCGGTATAAGACTTAATCTCGTTGCTGTCAAGCTTCCTTGTCGCGATACAAGGAATTGGTCTAGAGATGTCGGTCGTTTGCACCTTCAGCTTGCAGCTGCTGGCCTTGCAACCTCTTTCAAAGGCAATTATCCTGTTTATGTGCTCTTCATTACCAACTGTTTTCCAATACCAAATCTTTTTGCTTGCAAAGAGTTAGTTGAACATGAAGGAAATGTATGGTTATACAAACCAAACTTGAGTGTTTTGAGAGATAAGGTCCAGCTCCCAGTAGGATCTTGTGAACTTGCACTTTCTATGAGAGGCCAAGAGCTGGTGTACAATGGAAATGTTCCTAGAGAAGCCTATGCAACAATTCTGCATTCAGCTCATGATTATGTCTGTGGAGCTATAGCTGCCGCACAAAGCATCCGCATGTCCGGGTCGACTCGAGACCTTGTAATACTTGTTGATGAGACAATCAGTGGATACCACAGAAGTGGTTTGGAGGCAGCAGGTTGGAAAGTTAGAACAATACAGAGAATCAGAAACCCCAAAGCTGAAAAGGATGCTTACAATGAATGGAACTACAGCAAGTTCAGGTTATGGCAGCTGACAGATTATGACAAAATAATTTTCATTGATGCAGATTTGGTCATACTAAGAAACATAGATTTCCTATTTGGAATGCCACAAATCACTGCTACTGGAAATGATGCTACACTTTTTAACTCAGGTGTCATGGTCGTAGAGCCATCAAATTGCACATTCCAGCTCCTAATGGAACATATTAATGAGATTGAGTCCTACAATGGAGGGGACCAAGGGTACTTGAATGAAATATTTACATGGTGGCATAGGATACCAAGACACATGAACTTCTTGAAGCATTTTTGGGTTGGTGATGAGGAAGAGAAGAAACAAATGAAGACTATGTTATTCGGCGCTGAACCTCCAATTCTCTATGTCCTTCACTACCTTGGCATGAAGCCATGGTTATGCTTCCGGGATTACGATTGTAACTGGAATTCTGATTTATTTCATGAGTTTGCAAGTGATGTTGCACATGAAAAGTGGTGGAAGGTGCATGATGCAATGCCTGAGCTTTTGCAGCAGTTTTGCATGTTGAAGTCTAAGCAGAAGGCACAATTAGAGTGGGACCGAAGACAGGCTGAGATAGCAAACTACACAGATGGGCATTGGAGAATTAAAGTTAAAGATAAGCGCTTGAAGAAATGTATAGATAACTTGTGTAACTGGAAAAGCATGTTGAAGCATTGGGGAGAGACAAATTGGACAGATGATGAGTCTTATACTCCAACACCACCTGCCATTGCCACATCACATCTTTCTATTTTGTGA 1920 0.4089 MRGTMGTSPHAVEARHRLPASIEDLYKRRLSKSKGKDIEKPFHLSSTQDRISTRCKFSFLKLILLITICGTFIMLLYSPVVYNTNHLSSSGSRWIWGSEDPRYTSNVDIDWNDISKITKKLTGKNDFQGIGLLNFNKTEIGHWEHVIPDATHVVLHMDFAAKNVTWESLYPEWIDEEEETEVPVCPSLPSLRSPGIRLNLVAVKLPCRDTRNWSRDVGRLHLQLAAAGLATSFKGNYPVYVLFITNCFPIPNLFACKELVEHEGNVWLYKPNLSVLRDKVQLPVGSCELALSMRGQELVYNGNVPREAYATILHSAHDYVCGAIAAAQSIRMSGSTRDLVILVDETISGYHRSGLEAAGWKVRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLVILRNIDFLFGMPQITATGNDATLFNSGVMVVEPSNCTFQLLMEHINEIESYNGGDQGYLNEIFTWWHRIPRHMNFLKHFWVGDEEEKKQMKTMLFGAEPPILYVLHYLGMKPWLCFRDYDCNWNSDLFHEFASDVAHEKWWKVHDAMPELLQQFCMLKSKQKAQLEWDRRQAEIANYTDGHWRIKVKDKRLKKCIDNLCNWKSMLKHWGETNWTDDESYTPTPPAIATSHLSIL 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0730 639 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 304 554 IPR029044 -
Lal17g0730 639 Pfam Glycosyl transferase family 8 312 416 IPR002495 GO:0016757
Lal17g0730 639 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 1 20 616 - -
Lal17g0730 639 CDD GT8_Glycogenin 307 552 - -
Lal17g0730 639 PANTHER GLYCOGENIN SUBFAMILY MEMBER 20 616 - -
Lal17g0730 639 SUPERFAMILY Nucleotide-diphospho-sugar transferases 307 552 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0730 Lal-Chr17 5177157 5182089 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0730 13 639 Glycosyltransferase AT3G18660 67.290 0.0 878
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0730 K20890 - gmx:100780439 1193.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0730 17 5177157 5182089 Lal17g0730 17 5177157 5182089 ECH