Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0694 ATGGCTTCAATCTCCATAACCTCCACCACCGCTTTCTCTATCTACTCCCAATCCCATTCACACATTCCAAATTCCAAATCCACACGCTTTTACCTCCTAAAACATCATCAACTGATTCATCGCTCCAACAATAAACACATCCTAATTTCATTTCACCCACCCAAAGTTAGCACCTTTTTGCACCCATTTACTCGTTCCCACACACCCTCTTCAAATTTCTCAAACCCCACTTGTGAAAACTCACCTAGAAGAAGTTTAACCAAGTTTTTTTCAGAAAAGATTGCATTTTTACTCATTGGGACATTTATATTCATTGGTAGTTTCAACAAAAGAGCTGCTCTAGCAATAACACAACCCTCTTCTTCTGTGGAGGAGAAAGTGGAAATGGTGGAAGGGAAAGATGAGGAGGAAAAGTGGGAGAAGGTTTTGGAGAAGGATCCAAGGAATGTTGAGGCATTAAAGGTGATAATGTATGGGAAAATTAAGAGAGGGAAATCAAAGGAGGCTGTGAAGTTTGTGGAGAGTTTGATTGATGTTGAACCAAATGAGGTTGAGTGGAGGCTTTTGTTAGCACTGTGCTATGAGACAATGGGGGAGTTGAGTAAGGCTAAAAGATTGTTCAGGGAGATTTTGAAGCAAAAACCTCTTTTAGTTAGAGCTCTGCATGGTCTGGCTATGGTGATGCACAAAAATCATGAAGGTCCTGCCATGTTTGAAATGCTTAATAAGGCTCAAGAGTTAGCTTCTCGTGAAAACAGAGTTACGGAGGAGAGAAATATTAGAATCTTGATTGCTCAAATGCTTGTTGTACAGGGGGCTTTGGAGGAGGGCTTAAAAAAATTTCAAGAGTTGGTTGATGAAAACCCTCGAGATTTTAGGCCGTATCTTTGCCAGGGAATTATATACAGTCTCCTGGATAAAAAGGAAGAAGCTGCAAAGCAATTCGAAACATATCAATCTCTCGTACCGGAAGAGTTTCCGCAAAGGGGATTTCTTGATGATGTTGCATTAACAGCTAGAGGAACATCACGAGACCAGTTTCAGAAGAAATTTGGATATCAATTATCTTCTCAGAAATAG 1080 0.4028 MASISITSTTAFSIYSQSHSHIPNSKSTRFYLLKHHQLIHRSNNKHILISFHPPKVSTFLHPFTRSHTPSSNFSNPTCENSPRRSLTKFFSEKIAFLLIGTFIFIGSFNKRAALAITQPSSSVEEKVEMVEGKDEEEKWEKVLEKDPRNVEALKVIMYGKIKRGKSKEAVKFVESLIDVEPNEVEWRLLLALCYETMGELSKAKRLFREILKQKPLLVRALHGLAMVMHKNHEGPAMFEMLNKAQELASRENRVTEERNIRILIAQMLVVQGALEEGLKKFQELVDENPRDFRPYLCQGIIYSLLDKKEEAAKQFETYQSLVPEEFPQRGFLDDVALTARGTSRDQFQKKFGYQLSSQK 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0694 359 PANTHER OS05G0182100 PROTEIN 11 351 - -
Lal17g0694 359 SUPERFAMILY TPR-like 136 324 IPR011990 GO:0005515
Lal17g0694 359 Gene3D Tetratricopeptide repeat domain 131 254 IPR011990 GO:0005515
Lal17g0694 359 Gene3D Tetratricopeptide repeat domain 255 328 IPR011990 GO:0005515
Lal17g0694 359 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 11 351 - -
Lal17g0694 359 Pfam Tetratricopeptide repeat 161 221 - -
Lal17g0694 359 SMART tpr_5 150 183 IPR019734 GO:0005515
Lal17g0694 359 SMART tpr_5 184 217 IPR019734 GO:0005515
Lal17g0694 359 SMART tpr_5 292 325 IPR019734 GO:0005515
Lal17g0694 359 SMART tpr_5 258 291 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0694 Lal-Chr17 4910500 4914900 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0694 - - gmx:100795327 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0694 17 4910500 4914900 Lal17g0694 17 4910500 4914900 ECH