Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0692 ATGGAGCAAAATAAGGAGAAAAATGCTCCTTGGTTATCAGTACCACAGTTTGGAGACTGGGATCAGAAGGGTCAATTACCAGATTATTCAATGGATTTCACAAAAATCAGGGAAATGAGGAAACAAAACAAGAACAATTTATCCAGAGCAAGTCTTGGTAATGAAGAAGAGCTCAAAGCTTCAGCACCTAATACCATAAGCACTGGCCACAGTGATCACCAGCAACATAACCATTATCACCAAACCAACTCTCCAACTACAACAAGGAGAAGCTTCCTCAGATACTTCAACTGTTGTATAAAAGCCTGA 309 0.3981 MEQNKEKNAPWLSVPQFGDWDQKGQLPDYSMDFTKIREMRKQNKNNLSRASLGNEEELKASAPNTISTGHSDHQQHNHYHQTNSPTTTRRSFLRYFNCCIKA 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0692 102 PANTHER PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR AVRRPT-CLEAVAGE: CLEAVAGE SITE PROTEIN 1 101 - -
Lal17g0692 102 MobiDBLite consensus disorder prediction 63 86 - -
Lal17g0692 102 MobiDBLite consensus disorder prediction 1 25 - -
Lal17g0692 102 PANTHER PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR AVRRPT-CLEAVAGE: CLEAVAGE SITE PROTEIN 1 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0692 Lal-Chr17 4895731 4904070 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0692 - - gmx:100796591 176.792
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0692 17 4895731 4904070 Lal17g0692 17 4895731 4904070 ECH