Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0688 ATGTTGTCTTCTTCCCCTTCATCAGAAGAATCAGAAACTCCTCATAACCTTATCCCATCCCTCCCTGATGACGTGGCAATTAATTGTCTCTCACGTGTTCCTCGTTCTCACCACCCAACCCTCTCTCTCCTCTCCAAACCCATCCACTCCCTCCTCTCCTCCCCTCTCTTCTTCTCCGCCCGCTCCGCCGTCGAACACCTCCTCTACCTCACCCTTCGCCCACGCGCCAATCCCTTGCAGCACTTCACGCTTCACCTCAACCCCTTGACCAACCGCCGCTACCTCGTCCCCCTCCCTCCCATCCCTTCTCCTTCTGTTGGCTCCGCTTATGCTGTCCTGGGACCCACCATCTATGTTATCGGTGGGTCCCACAATGACATTCCTTGTAATCATGTTTGGCTTCTTGATTGCCGCTTCCACCGTTGGATCCCTGGTCCTAACATGCGCGTCGCGCGTGAGTTCCCTGCTGCTGGTGTTGTTGACGGTAAGATCTATGTTCTTGGTGGCTGCGTGGCTGACACGTGGTCACGCTCTGCTGCGTGGGCTGAAGTTTTCGACCCCGTTGTGAACCGGTGGGAGCGCGTGGCGAGCCCGGTCGAGTTTCGGGAAAAGTGGATGCACGCGAGTGCTGTACTGGGTGGGAAGTTTTACGCGATGGCCGACCGTGGTGGGATGGTGTTTGATCCCAGGAGTGGCGCGTGGGAGAGCGTGGAAATGGAGCTTGATAATGGGTGGAGGGGGAGGGCGTGTGTAGTTGATGAGGTTTTGTATTGCTATGATTATTTGGGGAAGATCAAGGGTTTTGATGTGAGGAGTGGGGTGTGGAAGGAGGTGAAAGGGTTGGGGAAGGGTTTGTTGCCGAGGTTTTTGTGTGGCGCTACAATGGCGAATGTTGGCGGGAAATTAGTCGTGGTTTGGGAGTGTGATGGGAATGGGAAGGAGATGGAAGTTTGGTGTGCTGAGATTGAGGTCAAAATGGATGGTACTAATGGAGAATTGTTGGGTGAAGTTGGTTGGATTGAGAAGGTTCTTTGTGTTCCTAAAGGCTCCTCCATCGTGCAGTGTTGTTCTGTCACATTGTGA 1083 0.5392 MLSSSPSSEESETPHNLIPSLPDDVAINCLSRVPRSHHPTLSLLSKPIHSLLSSPLFFSARSAVEHLLYLTLRPRANPLQHFTLHLNPLTNRRYLVPLPPIPSPSVGSAYAVLGPTIYVIGGSHNDIPCNHVWLLDCRFHRWIPGPNMRVAREFPAAGVVDGKIYVLGGCVADTWSRSAAWAEVFDPVVNRWERVASPVEFREKWMHASAVLGGKFYAMADRGGMVFDPRSGAWESVEMELDNGWRGRACVVDEVLYCYDYLGKIKGFDVRSGVWKEVKGLGKGLLPRFLCGATMANVGGKLVVVWECDGNGKEMEVWCAEIEVKMDGTNGELLGEVGWIEKVLCVPKGSSIVQCCSVTL 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0688 360 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 6 343 - -
Lal17g0688 360 SUPERFAMILY Kelch motif 67 337 IPR015915 GO:0005515
Lal17g0688 360 MobiDBLite consensus disorder prediction 1 20 - -
Lal17g0688 360 MobiDBLite consensus disorder prediction 1 15 - -
Lal17g0688 360 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP6 6 343 - -
Lal17g0688 360 SMART kelc_smart 116 162 IPR006652 GO:0005515
Lal17g0688 360 SMART kelc_smart 163 213 IPR006652 GO:0005515
Lal17g0688 360 Pfam Kelch motif 152 197 IPR006652 GO:0005515
Lal17g0688 360 Pfam Kelch motif 107 149 IPR006652 GO:0005515
Lal17g0688 360 Gene3D - 60 328 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0688 Lal-Chr17 4877459 4878541 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0688 21 344 Miscellaneous Gene Families AT4G33900 32.394 2.85e-46 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0688 - - gmx:100798508 523.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0688 17 4877459 4878541 Lal17g0688 17 4877459 4878541 ECH