Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0687 ATGGCTCTCTCTCTTACTATCTCAGTCCCTTTCCCAAAACTACAGCAACATTTCCATACTCTCTTCAAACCAAAACCAAATCTTTCTTTCATTCCTTCTTCATATTCCTTAGCTGAATTCAAAGTGGGTCATGATTTACCACCTAACTACGCTGATTTGCTTCCTAAACCCGACCCTCTCCTTCGCAGAAGAGCCGGTATTCTACTCCATCCGACGTCGTTTCCAGGCCCTTATGGGATCGGTGACTTCGGTCATGAGGCCTTTCGTTTCATTGACTGGCTCCATTACTCTGGTTGCTCCCTTTGGCAGGTGCTACCTCTAGTGCCTCCTGATGGAGCTGGATCTCCTTACTCTAGCCAGGATGCAAATTGTGGCAACACACTCTTGATCTCTCTCGAACACCTTGTTGAGGATGGCTTGTTGGAAAAGCATGAGCTTCCTCAACCAATTGATGCCGAGCAAGTGAATTTTTCAGTGGTTGCTGATCTTAAGAATCCTTTGATATCTAAAGCTGCAAAGAGGCTCATATCAAGTGAAGGGGAGCTCAAAAAACAGCTTGAGAATTTTCGTAGGGACCCTACCATATCAAGCTGGCTTGAAGATGCAGCTTATTTCGCTGCTATTGATGACAGTTTAAACACAATTGGTTGGTACAATTGGCCTGAACCTTTAAGAAATCGCCATCTTGTAGCTCTAGAAGATATTTGTCAACAAAAGAGAGATTTTATAGATGTATTTATTGCCCAACAGTTCTTGTTCCAAAGGCAATGGCAGAAAGTTCGCAACTATGCACAGAGCAGAGGAGTCAGTATAATGGGAGACATGCCTATTTATGTGGGTTATCATAGTGCGGATGTTTGGGCAAATAAAAACCAGTTTTTACTGAATAGGAAAGGCTTTCCTCTTTTAGTTAGTGGTGTTCCACCGGATGCATTCAGTGATACTGGTCAGCTGTGGGGCAGCCCTCTGTATGATTGGAATGCCATGGAGAAAGAAGGATACTCATGGTGGATACGCCGCCTACGGCGTGCACAGGATTTATATGACGAATTTAGAATTGATCACTTTAGAGGATTTGCTGGATTTTGGGCTGTTCCGTATGAAGCAAAAGTAGCTATGGTTGGAAAGTGGAAGGTAGGACCTGGATTATCTTTCTTTGATGCCATTTTCAGAGCTATTGGAAGGATTAATATTATAGCAGAAGACTTGGGAGTTATCACTGAAGATGTAGTCCAACTAAGAAAGTCTATTGGAGCACCTGGAATGGCTGTTCTCCAGTTTGGGTTTGGAGGTGATGCTGGTAACCCTCATCTGCCTCATAATCAGGAGTGCAATCAAGTTGTTTATACAGGGACTCATGACAATGACACTATTAAAGGTTGGTGGGAAGCTTTGAAGGCAGAAGAGAAATCCAATGTATTAAGTTACCTTTCACTAACGGAGAAAGATGACATTTCATGGGCTCTAATCCAGACAGCACTAGCTTCGGTTGCTCAAACAGCAATAATACCTATGCAAGATGTTCTTGGACTGGGAAGTTCTGCAAGGATGAATACTCCTGCGACTCAGTTTGGAAACTGGGGTTGGAGAATTGCAAGTTCTGTGAGCTTTGATAGCTTGGAGAAAGAGGCAGACAGACTTAAAGAGATGCTTTCGATGTATGGCCGGCTTTGA 1674 0.4337 MALSLTISVPFPKLQQHFHTLFKPKPNLSFIPSSYSLAEFKVGHDLPPNYADLLPKPDPLLRRRAGILLHPTSFPGPYGIGDFGHEAFRFIDWLHYSGCSLWQVLPLVPPDGAGSPYSSQDANCGNTLLISLEHLVEDGLLEKHELPQPIDAEQVNFSVVADLKNPLISKAAKRLISSEGELKKQLENFRRDPTISSWLEDAAYFAAIDDSLNTIGWYNWPEPLRNRHLVALEDICQQKRDFIDVFIAQQFLFQRQWQKVRNYAQSRGVSIMGDMPIYVGYHSADVWANKNQFLLNRKGFPLLVSGVPPDAFSDTGQLWGSPLYDWNAMEKEGYSWWIRRLRRAQDLYDEFRIDHFRGFAGFWAVPYEAKVAMVGKWKVGPGLSFFDAIFRAIGRINIIAEDLGVITEDVVQLRKSIGAPGMAVLQFGFGGDAGNPHLPHNQECNQVVYTGTHDNDTIKGWWEALKAEEKSNVLSYLSLTEKDDISWALIQTALASVAQTAIIPMQDVLGLGSSARMNTPATQFGNWGWRIASSVSFDSLEKEADRLKEMLSMYGRL 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0687 557 Pfam 4-alpha-glucanotransferase 69 532 IPR003385 GO:0004134|GO:0005975
Lal17g0687 557 PANTHER 4-ALPHA-GLUCANOTRANSFERASE DPE1, CHLOROPLASTIC/AMYLOPLASTIC 34 557 IPR003385 GO:0004134|GO:0005975
Lal17g0687 557 TIGRFAM malQ: 4-alpha-glucanotransferase 61 552 IPR003385 GO:0004134|GO:0005975
Lal17g0687 557 Gene3D Glycosidases 60 557 - -
Lal17g0687 557 SUPERFAMILY (Trans)glycosidases 46 556 IPR017853 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0687 23 557 Glycoside Hydrolase AT5G64860 72.222 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0687 K00705 - gmx:100785271 950.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0687 17 4869276 4876084 Lal17g0687 17 4869276 4876084 ECH