Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0686 ATGGGGGAGTCAAGATCTTCATCAACACACTCAACAACATTTCAAGATTCTTCAATAACCACCACCACACCTCCCCCACCACCACCACCACCACCATCATCTTCAAACAAAACTACACTCCTCCAACCACAACCTTATAAAAAGAAACACACAACCAAAGTGGTTCGTGTCTTTCGTTCGGTGTTTAGAGCTTTACCTATTATGAAACCATGCAAGTTCCATGCAATGCCTATGGGAGGCCTAGTGAGTCATCATCACCAACACTTTAAGAACATTAATGCAAATGATAACAAAATTTGTGGAACATTATTTGGGTACCGTAAAGGACGAGTTAGTTTCTCTTTGCAAGAAAATCCAAAGTGTTTACCTTCTTTGGTGCTTGAGTTGTCTATTCAAACCAATATGTTGCAGAAGAAAATGGCTGAAGGGATGGTTAGGATGGCATTTGAATGTGAAAAGCGACAAGAAAAGGACAAGACTAGGTTGATGGACGAACCACTATGGACAATGTATTGTAATGGTAAGAAGAGTGGTTATGGTGTGAGGAGGGAAGCAACAGAGGAAGATTTGAATGTGATGGAACTGCTCAAGGCTGTGTCAATGGGTGCAGGTGTGCTTCCAGGAAAATCTCAAAATGTTGAAGATGCTTATGGAGAGTTGACTTACATGCGAGCCCATTTCGACCATGTAGTGGGCTCAAAAGATTCTGAAACTCTCTATATGTTGAGCCCAGATGGAAATTGTGGGCCTGAACTTACTATGTTTTTTGTCAGAATTTAA 780 0.4115 MGESRSSSTHSTTFQDSSITTTTPPPPPPPPPSSSNKTTLLQPQPYKKKHTTKVVRVFRSVFRALPIMKPCKFHAMPMGGLVSHHHQHFKNINANDNKICGTLFGYRKGRVSFSLQENPKCLPSLVLELSIQTNMLQKKMAEGMVRMAFECEKRQEKDKTRLMDEPLWTMYCNGKKSGYGVRREATEEDLNVMELLKAVSMGAGVLPGKSQNVEDAYGELTYMRAHFDHVVGSKDSETLYMLSPDGNCGPELTMFFVRI 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0686 259 MobiDBLite consensus disorder prediction 1 20 - -
Lal17g0686 259 Pfam Protein of unknown function, DUF617 99 258 IPR006460 GO:0010274
Lal17g0686 259 TIGRFAM A_thal_3588: uncharacterized plant-specific domain TIGR01570 100 259 IPR006460 GO:0010274
Lal17g0686 259 MobiDBLite consensus disorder prediction 1 48 - -
Lal17g0686 259 PANTHER PROTEIN MIZU-KUSSEI 1 10 259 IPR006460 GO:0010274
Lal17g0686 259 MobiDBLite consensus disorder prediction 21 36 - -
Lal17g0686 259 PANTHER PROTEIN MIZU-KUSSEI 1 10 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0686 Lal-Chr17 4866419 4867726 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0686 - - mnt:21402978 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0686 17 4866419 4867726 Lal17g0686 17 4866419 4867726 ECH
Lal17g0686 17 4866419 4867726 Lal4g0596 4 4342080 4343436 LSH