Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0680 ATGGAAGATAAATGTTACACTCTAGATGGCACAATGGATCTTGGTGGACACCCTGTTCTTGCTTCTACAACTGGGAAATGGAAAGCTTGCTATTTCATTCTTGTTTACCGAGGATTGGAAAGATTTGCCTACTATGGCGTAGCTGCAAATTTGGTGAATTATATGACAACCCAACTCAACAAAGATGTAACATCATCAATAAGCAATGTCAATAACTGGTCTGGCTCAGCATGGATAGCTTCATTTCTTGGTGCTTACATGGCTGATTCTTTTTTGGGTCGTTTTTGGACAATCACCTTTTCCTTGATCATATACGCCATAGGATTTGTGCTTCTAGCCCTAACAACTTCACTAAGGAGCTTGAGACCAACATGTAAAAATGGAATTTGCAACAAAGCAACTAACTTACAACTAACATTATTCTATTTGTCACTATACACCATAACTATTGGTAGTGGTGCAGTTAAACCCAATATGTCAGCATTTGGTGCAGACCAATTTGATGACTTCAACCCTAAAGATAAAAAGCTGAAAGTTTCATTCTTCAACTGGTGGTCCTTTAACAACTCATTTGGTACTTTAGTTGCCACTTTGGTTGTTGTGTACATTCAAGAGAGATTTGGTTGGGGATTAGGGTATGGCTTGTCAGCTTTTGGTTTTTTACTTTCCCTCGTTACCTTCTTTTTGGGCACCCCAATATATAGGCATAAAGCTAGAAAGACAAGGAGCATTACATTGGATTTTATAAGAGTCATGGTTGTTGCTTTCAGAAATAGAAAGCTTCAGCTTCCTAATAGCCCTTCAGAGCTGCATGAATTTGAGTTACATCATTACATAAACAGTGGAAGTAGACAGATTTGTCACACACCTCATTTCAGGTTCTTAGACAAGGCTGCAATAAAAGAAAGCAAAGTAGATGTCTCAAATCCACTATGCACAGTGACTCAAGTTGAAGGAACCAAGCTTGTTGTAAGGATGTCTCAGATATGGTTACTAATGCTAATTCCCAGTAACTTCTGGGCAGTAGAAGTTACCATTTTTGTCAAGCAAGGCACAACCTTGGAGAGGAACCTTGGTCCCAACTTCCATATACCAGCAGCTTCTCTCTGGAGCATTGTAGTGATTACTATGCTCATTTCTCTACCCATTTATGACCATTACTTTATACCATTCATGCGTCAAAGAACTGGAAATCATAGAGGAATCACATTGCTTCAAAGGGTTGGCGCAGGAATTGCCATCCAAATCATAGCAATAGCGATTACTTGTGCTGTAGAAATGCATAGAATGCATGTTATCCGAATGCAACACGTAGTTGGTCCTGAAGAAATAGTTCCTATGAGCATATTCTGGTTATTGCCTCAACATGTTCTACTTGGAATTTCAGATACATTTCTTGTCACTGGATTGCATGAATTCTTCTATGATCAATCCCCGGAAGAAATGAAATGCCTAGGCACAACATTTTACACTAGCATTGTAGCAGCAGGAAACTTTTTTAATAGCTTTCTAGTGACAATGATAGATAACTTAACACAGAAGATGGGTAGTGAAAGCTGGATAGGGAACAATCTTAATGACTGTCACCTAGAATATTACTATGGGTTTCTTTTTCTGATATCTACATTTAATTTTGGGGTCTTTTTGTGGGCATCAAGTGGATACATTTACAAAAGAGAAAATACAATAGAAGTGAGTGACATGGAGATTGGAAAGCATAGAAGAAAGTAA 1731 0.383 MEDKCYTLDGTMDLGGHPVLASTTGKWKACYFILVYRGLERFAYYGVAANLVNYMTTQLNKDVTSSISNVNNWSGSAWIASFLGAYMADSFLGRFWTITFSLIIYAIGFVLLALTTSLRSLRPTCKNGICNKATNLQLTLFYLSLYTITIGSGAVKPNMSAFGADQFDDFNPKDKKLKVSFFNWWSFNNSFGTLVATLVVVYIQERFGWGLGYGLSAFGFLLSLVTFFLGTPIYRHKARKTRSITLDFIRVMVVAFRNRKLQLPNSPSELHEFELHHYINSGSRQICHTPHFRFLDKAAIKESKVDVSNPLCTVTQVEGTKLVVRMSQIWLLMLIPSNFWAVEVTIFVKQGTTLERNLGPNFHIPAASLWSIVVITMLISLPIYDHYFIPFMRQRTGNHRGITLLQRVGAGIAIQIIAIAITCAVEMHRMHVIRMQHVVGPEEIVPMSIFWLLPQHVLLGISDTFLVTGLHEFFYDQSPEEMKCLGTTFYTSIVAAGNFFNSFLVTMIDNLTQKMGSESWIGNNLNDCHLEYYYGFLFLISTFNFGVFLWASSGYIYKRENTIEVSDMEIGKHRRK 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0680 576 Gene3D MFS general substrate transporter like domains 1 565 IPR036259 -
Lal17g0680 576 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 11 565 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lal17g0680 576 SUPERFAMILY MFS general substrate transporter 22 551 IPR036259 -
Lal17g0680 576 PANTHER PROTEIN NRT1/ PTR FAMILY 5.1 11 565 - -
Lal17g0680 576 Pfam POT family 95 521 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0680 Lal-Chr17 4821034 4824338 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0680 4 561 Organic Solute Cotransporters AT2G40460 59.857 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0680 - - gmx:100789214 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0680 17 4821034 4824338 Lal17g0680 17 4821034 4824338 ECH