Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0678 ATGGAAATGGAGTCACCAAGGCCCCCACTTCCACAACACAAGTCTCACACCAAACCCATCACTCGTCTCAATTCCTACGTAGCCAAATCCAGAGTAGGCAAATATTTCAAGCTAAACCAACGTAACTCAACCTTCACCACTGAACTCCGTGCTGGAACCACTACCTTCCTCACCATGGCTTACATCCTTGCCGTAAATGCCTCCATCCTCACCGACTCTGGTGGAACTTGTTCTGTCTCAGATTGTATCCCTCTTTGTTCTGATGCATCAATACCCATTTCGAACTGCACAGGTTCATCACTTCATGTTATCAAGCCCGGCCCATCTTGCAAGTTTGATCCGGTTAACCCGGGCTATGCTGCCTGTCTTGAGAAAACCCGGAAGGACTTGATTGTTGCCACCGTCGCATCTGCTCTTATTGGCTGCGTTATCATGGGGGCCTTCGCTAACCTCCCTCTGGGCCTTGCACCGGGCATGGGTACCAATGCTTACTTCGCTTACACTGTCGTGGGCTTTCACGGTTCTGGCAACATTTCATACCAGAGCGCTCTTGCTGCTATTTTTTTAGAGGGTTTAATCTTCTTGATCATTTCAGCAGTCGGGCTTCGGGCCAAGCTCGCAAAGGTTATACCTAAGCCCGTTAGGATCAGCTCCTCCGCCGGGATTGGGCTTTTTCTCGCCTTCATTGGGCTTCAGAATAACCAAGGAATCGGGCTCATCGGGTACAACTCAGCGACTCTAGTCACTCTCGCGGGCTGTCCTAACTCATCGCGGGCTTCACTTGCTCCGGTTATGACGTTGGCTAACGGCACCATCGCTTTGCTTCCAGGAGGGGCTGTATCAGGTGGTATTTTCTGCGTCCAGGATAGAATGCAAAGCCCAACACTCTGGCTGGGCTTGGTGGGCTTTATTATAATTGCTTTCTGCTTAGTGAAAAACGTTAAGGGTGCTATGATCTACGGGATTGTTTTCGTAACCGCCGTTTCATGGTTCCGGAACACTAAAGTGACGGCGTTTCCGAACACAGATGCGGGTAACTCGGCTTACGAGTATTTCAAAAAAGTCGTGGACGTACACGTGATAAAAAGCACAGCGGGTGCTTTAAGTTTCAAGAATATCGGAACGGGAAATTTTTGGGAAGCTTTGTTCACGTTTTTGTACGTTGATATTTTAGACACAACGGGAACGTTGTACTCTATGGCGAGATTCGCAGGTTTCTCGGACGAGAAAGGAGATTTTGAGGGTCAATATTTCGCGTTTATGTCAGATGCCACGTCGATAATTGTGGGGTCCTTACTAGGTACATCCCCCGTGACGGCTTTTATAGAGTCGTCAACGGGGATCAGAGAAGGAGGACGAACGGGGATAACCGCATTAACCATTGCGGCGTATTTTTTCTTGGCATTCTTTTTCACACCGTTATTGGCATCGATACCGGCGTGGGCGGTGGGGCCGCCGTTGATATTGGTGGGTGTGTTGATGATGAAATCGGTGATGGATATTGATTGGGAAGATATGAGGCAGGCCATACCAGCGTTTGTGACACTTTTATTAACACCTTTGACTTATTCTATTGCTTATGGTCTTATTGGAGGGATTGGGACTTACATTGTGTTGAACATATGGGATTGGGGGTGGGAGATTTTAGGTCACTATAGGTCTGTGGAAACAACTAGGGTGCCTAATGGTTCCCATCATGTTGGGGCCAATGGGGGTGTAGTTCTACATCAACAACCCAATCCATAA 1746 0.4828 MEMESPRPPLPQHKSHTKPITRLNSYVAKSRVGKYFKLNQRNSTFTTELRAGTTTFLTMAYILAVNASILTDSGGTCSVSDCIPLCSDASIPISNCTGSSLHVIKPGPSCKFDPVNPGYAACLEKTRKDLIVATVASALIGCVIMGAFANLPLGLAPGMGTNAYFAYTVVGFHGSGNISYQSALAAIFLEGLIFLIISAVGLRAKLAKVIPKPVRISSSAGIGLFLAFIGLQNNQGIGLIGYNSATLVTLAGCPNSSRASLAPVMTLANGTIALLPGGAVSGGIFCVQDRMQSPTLWLGLVGFIIIAFCLVKNVKGAMIYGIVFVTAVSWFRNTKVTAFPNTDAGNSAYEYFKKVVDVHVIKSTAGALSFKNIGTGNFWEALFTFLYVDILDTTGTLYSMARFAGFSDEKGDFEGQYFAFMSDATSIIVGSLLGTSPVTAFIESSTGIREGGRTGITALTIAAYFFLAFFFTPLLASIPAWAVGPPLILVGVLMMKSVMDIDWEDMRQAIPAFVTLLLTPLTYSIAYGLIGGIGTYIVLNIWDWGWEILGHYRSVETTRVPNGSHHVGANGGVVLHQQPNP 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0678 581 Pfam Permease family 293 526 IPR006043 GO:0016020|GO:0022857|GO:0055085
Lal17g0678 581 Pfam Permease family 124 248 IPR006043 GO:0016020|GO:0022857|GO:0055085
Lal17g0678 581 PANTHER XANTHINE/URACIL PERMEASE C887.17-RELATED 14 565 IPR045018 GO:0015205
Lal17g0678 581 PANTHER ADENINE/GUANINE PERMEASE AZG1 14 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0678 Lal-Chr17 4805548 4807293 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0678 K06901 - gmx:100788148 954.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0678 17 4805548 4807293 Lal17g0678 17 4805548 4807293 ECH
Lal17g0678 17 4805548 4807293 Lal21g0632 21 4777257 4779041 LSH