Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0676 ATGGGTGAGGGAGAACAATTTCAGCTTGGAACTGTGGGAGCCTTGTCTCTATCTGTGGTGTCATCAGTGTCAATTGTGATTTGCAATAAGGCATTGATGAGCTCACTGCATTTCATTTTTGCTACAACTTTGACAAGTTGGCATCTGCTTGTCACATTTTGTTCACTTCATGTGGCACTAAAAATGAGAATTTTTGAGCACAAACCTTTTGAACAGAAAGCTGTGATGGGATTCGGAGTTCTAAATGGAATCTCAATTGGACTTCTAAATTTGAGCCTGGCCTTCAATTCTGTGGGCTTCTATCAGATGACTAAGCTGGCAATCATTCCATGTACTATTCTGCTGGAGATCCTATTTCTCGGGAAGAAATTCAGTAAACGAATACAGTTTGCCCTTGGTATCCTCCTTGTGGGTGTTGGGATTGCAACGGTTACTGATTTGCAGCTCAATGCTTTGGGCTCTTTCTTATCTTTACTAGCAGTGATTACAACATGTGTTTCACAGATTGTTGTCATTGTTCTTTCATGTCTTATCTCTATATCTGTAAATTTTAGTACATTTCTTGTAATTGGGAAGACATCTCCAGTCACCTATCAGGTTCTCGGACATCTGAAGACATGTCTGGTATTAGCGTTCGGTTATATTATTGTACGCGACCCTTTTAGCTGGAGGAACATACTAGGGATTTTGGTAGCCATGGTTGGGATGCTTCTATATTCCTACTATTGCACTCTTGAGAGTCAGCAAAAAACACCTGAAGCAGAGGCAAGAGAAGGCGAATCCGATCCTCTTATCAATGTTGAAAGTGGAGGAGGTGTTGGAGTTAAGATGGGTGAAGGAGAACGTTTTCAGCTTGGAACTATAGGAGCGTTGACTCTATCTGTGGTGTCATCAGTGTCTATTGTGATTTGCAATAAGGCACTGATGAGCTCACTGCATTTCATTTTTGCTACAACTTTGACAAGCTGGCATCTGCTTGTTACATTTTGTTCCCTTCATGTGGCACTTAAAATGAGATTCTTTGAGCACAAGCCTTTTGAGCAGAAAGCTGTTATGGGATTTGGGATTTTAAATGGAATCTCAATTGGGCTTCTAAATCTTAGCCTTGGGTTCAATTCTGTTGGATTCTATCAGATGACTAAGCTGGCAATCATTCCTTGTACTGTAATGTTGGAGACCCTCTTTCTTGCAAAGAGATTCAGTAAAAGTATTCAATTTTCTCTAGGTGTCCTCCTTCTTGGTGTTGGGATTGCAACTATTACTGATTTGCAGCTCAATGCTTTGGGATCTTTCTTATCTTTGCTAGCGTTTTTCATTGTTCTTTCCTGCCTCATCTCCATCTCTGTCAACTTTAGTACATTTCTTGTTATCGGGAAGACATCTCCGGTCACTTATCAGGTTCTTGGACACCTGAAGACATGCCTTGTATTGACATTCGGTTATGTTTTACTTCAAGACCCATTCAGCTGGAGAAACATACTTGGTATTTTGATAGCCATGGTTGGGATGTTTCTATATTCTTACTATTGCACTCTTGAGAATCAGCAAAAAGCTATTGAAGCTGCAGCACAAGCATCCCAGGCGAAGGAAGTTGAATCCGATCCTCTCCTTAATGTCGAAAATGGAAGTACAGTTGCAACTGATACCTTAGAACAAAAGGCCCAAGCATGGAGCAAAGACAAAGACTAA 1689 0.4073 MGEGEQFQLGTVGALSLSVVSSVSIVICNKALMSSLHFIFATTLTSWHLLVTFCSLHVALKMRIFEHKPFEQKAVMGFGVLNGISIGLLNLSLAFNSVGFYQMTKLAIIPCTILLEILFLGKKFSKRIQFALGILLVGVGIATVTDLQLNALGSFLSLLAVITTCVSQIVVIVLSCLISISVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYIIVRDPFSWRNILGILVAMVGMLLYSYYCTLESQQKTPEAEAREGESDPLINVESGGGVGVKMGEGERFQLGTIGALTLSVVSSVSIVICNKALMSSLHFIFATTLTSWHLLVTFCSLHVALKMRFFEHKPFEQKAVMGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVMLETLFLAKRFSKSIQFSLGVLLLGVGIATITDLQLNALGSFLSLLAFFIVLSCLISISVNFSTFLVIGKTSPVTYQVLGHLKTCLVLTFGYVLLQDPFSWRNILGILIAMVGMFLYSYYCTLENQQKAIEAAAQASQAKEVESDPLLNVENGSTVATDTLEQKAQAWSKDKD 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0676 562 PANTHER SOLUTE CARRIER FAMILY 35 172 264 - -
Lal17g0676 562 PANTHER SOLUTE CARRIER FAMILY 35 2 170 - -
Lal17g0676 562 PANTHER SOLUTE CARRIER FAMILY 35 439 537 - -
Lal17g0676 562 PANTHER SOLUTE CARRIER FAMILY 35 278 437 - -
Lal17g0676 562 SUPERFAMILY Multidrug resistance efflux transporter EmrE 435 507 - -
Lal17g0676 562 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 439 537 - -
Lal17g0676 562 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 278 437 - -
Lal17g0676 562 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 2 170 - -
Lal17g0676 562 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 172 264 - -
Lal17g0676 562 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 144 - -
Lal17g0676 562 Coils Coil 512 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0676 Lal-Chr17 4778809 4793993 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0676 391 553 Organic Solute Cotransporters AT1G77610 26.380 1.09e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0676 K15285 - gmx:100789517 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0676 17 4778809 4793993 Lal4g0587 4 4258102 4262381 LSH