Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0671 ATGGTGCTTCCCATCATTTGCCACAATAAAATCAGCTTCAGCTTCAGCGAAATACCGAAGCGATCGAATTCTATATCCACACAATGCATAAAAAATTCGCAAGCTTCCTTTGGGGTTTTCTTTGCTGGAGAGCTGAATTCTGTATTTGAAGCTATGGTAGATACACAACCAAGTTTGTCACCCTCGCCCGTGTTTAACCAAAAACCTTTATCACTTGATGAAGAACTCTGGCTATTTGCTGAAGAGAGGGCCCAAGAGATAATATGTGTAGTTCAACCTAATGTACTTTCTGAGGCCATCAGAAAGGAGGTTATCGATTATGTTAAGGGGCTGATTAAAAGTTACTTTGGAGCAGAGGTCGTCCCATTCGGATCGGTCCCGCTAAAAACCTATCTTCCTGATGGCGATATTGATTTCACAGTTCTCACTCATGAGAACGCAGACGGGGATTTGGCACAAACAGTATGTAGTATACTTGAAAGTGAAAAAGACTCTGGACAGGATGTAAAAGACATACAACATATACGTGCACAGGTTCAGATTGTGAAATGCACAGTGAAAGGTATAGCAGTAGACATTTCTTTTAATCAGATGGCAGGACTCTATGCTCTACACTTTTTGGAGGAGATTGATAAGCTTCTTGGGAGAAACCATCTTTTCAAACACAGTATCATCTTAATCAAAGCTTGGCTGTATTATGAAAGCCGGATTCTTGGTGCACACCATGGCTTGTTATCAACATATGCAGTCGAAATATTAGTGTTGTATATTGTCAATCGTTTTCATTCATCCGTGGGCGGTCCTCTAGAGGTGCTATACACATTTTTGGACTACTATGGTAAATTTGATTGGAAGACTAATTATATCAGTGTAGATGGTCCTAAAGCCTTATCTACCCTTCCAGAAATTGTTGTAATACCAATTCATATGCTTGCTGCAGAGACACCAGAATGTGATCAGGCTGGATTCTTGCTCAGTAAAGAGTTTCTGAGAAGTTATAGGGATATGTCCTTTGTTCAAGCAACATCGTCGGGGACCAAAACCAATGAATTTCCCACAAAGTTCATGAACATCTTGGATCCTCTAAAAAGCAACAACAATCTAGGCCGCAGTGTCAGCATAGGCAATTTACATCGAATAAAAATGGCTCTTTCCTATGGCGCTCAAAAGCTTAAGGATATCCTAATGCTTCCAGGAGCAGGCATGGGTGCAGGAATTGAGCATTTTTTCAAGATGACTTTGGATAGAAATGGAAAAGGAGCAAGGCCAGATGTTGATGTTCCTGTCGCTACATTTGGTACCGGAAGATCTGAGGAGTCTGACCTCCGTGGAGATTGTGACAGTTACTATGTTGGCCTACAACATGTTCAATCGTATCATGATTATGCCGTGCCACTCACTGCACATGCCAGTTTTCTGTCATCTCCTTCTCTGGCTGATATGCACGCACTGCCGACATACTATCATCCAATGGGTAACGACATATATGCCCTAGGCCAGACACACTATCATCCAAATGCTCCACATGCAACTTACTACCTTGAAGAAAATCTCACGGGTTCGACACTCTATTATCCAAATGCTCCACAAGAAACTTACAGCCTTGTAGAAAATGTTCCAGCACAAACACTCTATCATCCAAATGCTCCACAAGAAACTTACAGCCTTGTAGAAAATGCCCCAGCACAGACACTCTATCAACCAACTGCTCCACAAGAAACTTACAGCCTTGTAGAAAATGCCCCAGCACAGACACTCTATCAACCAACTGCTTCACAAGCTACTTACAGTCTTGACAAAAATGTGAAATCGCGAGGAACAGGCCCATATATACCAGACATGACTCGTAGTTCATACCGGGATTTGCAAGCAAGGGCGACCAAGCCAAGGAGATATATCCCTGGGAACCGTGATGTGTTGCCCAAATCACCTCTAAGTAAGCAATCAGTGAAGGTTGAGGTTCTGTCTGAAACAGACACAGATGATAAGTCAAGATCATTTGAGCTCGCAAATGAAGATTTCCCTGTGCTTCCAACCATCCGCAAGACAAACCCAGCAGAAGGCGTGGATGGTAATTCGAAATCAACGGAAGAGTTCCCTCCTCTTCCAAGCATTCGCCAGACATCAGAAGCCATAGAGGCTGTTAAGTTAACTGGTCAGGCCAGGAATTTATCTTCGTCCCAACTGACTATGGAGCTGTCAAACAAAAAATTCCCTGTTCTTCGGAACATTCGCAAGACCAGCCCTTCTGAACCCCAAGGATCTGTGAAGTTAGCTGAGCAGACTGGGAATTCCTCTTTGCCCAAACTGAAAATTGAGCTCACTGATGAAGAATTCCCTCTTCTTTCGAGCATTTGCAAGACCAGCCAAAAAAAATCCCAAGGGTCTGTTATGTTAACTGGGAAGGGCAAGAATTCCTCTCCATCTCTACTGAAAACTGTGCTCATGAATGAAGAATTCCCTCCTCTTCCAAGCATTCGCAAGGCCAAATCAGAAGGCCAATCGTCTGTTCAGTTACATGATGAAGCTAAGAGTTTCTCTTCATCCCTACTGAAGATTGAGTTTGGAACTTACAGCAAGTCAAAATCACTGACAAAACCAAGTTGGCCAGCCAAGGATGAAAAAGAAGGCTCGGGTGTTTTATCGTCTGGAGGCACTATGCTAGCTGTCCCAAAGGTGGCAGAGGAAGGTATTGAGAGTGATGAAGACAGGAGTTGGATTGACAGCATTTAA 2733 0.431 MVLPIICHNKISFSFSEIPKRSNSISTQCIKNSQASFGVFFAGELNSVFEAMVDTQPSLSPSPVFNQKPLSLDEELWLFAEERAQEIICVVQPNVLSEAIRKEVIDYVKGLIKSYFGAEVVPFGSVPLKTYLPDGDIDFTVLTHENADGDLAQTVCSILESEKDSGQDVKDIQHIRAQVQIVKCTVKGIAVDISFNQMAGLYALHFLEEIDKLLGRNHLFKHSIILIKAWLYYESRILGAHHGLLSTYAVEILVLYIVNRFHSSVGGPLEVLYTFLDYYGKFDWKTNYISVDGPKALSTLPEIVVIPIHMLAAETPECDQAGFLLSKEFLRSYRDMSFVQATSSGTKTNEFPTKFMNILDPLKSNNNLGRSVSIGNLHRIKMALSYGAQKLKDILMLPGAGMGAGIEHFFKMTLDRNGKGARPDVDVPVATFGTGRSEESDLRGDCDSYYVGLQHVQSYHDYAVPLTAHASFLSSPSLADMHALPTYYHPMGNDIYALGQTHYHPNAPHATYYLEENLTGSTLYYPNAPQETYSLVENVPAQTLYHPNAPQETYSLVENAPAQTLYQPTAPQETYSLVENAPAQTLYQPTASQATYSLDKNVKSRGTGPYIPDMTRSSYRDLQARATKPRRYIPGNRDVLPKSPLSKQSVKVEVLSETDTDDKSRSFELANEDFPVLPTIRKTNPAEGVDGNSKSTEEFPPLPSIRQTSEAIEAVKLTGQARNLSSSQLTMELSNKKFPVLRNIRKTSPSEPQGSVKLAEQTGNSSLPKLKIELTDEEFPLLSSICKTSQKKSQGSVMLTGKGKNSSPSLLKTVLMNEEFPPLPSIRKAKSEGQSSVQLHDEAKSFSSSLLKIEFGTYSKSKSLTKPSWPAKDEKEGSGVLSSGGTMLAVPKVAEEGIESDEDRSWIDSI 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0671 910 CDD NT_PAP_TUTase 100 210 - -
Lal17g0671 910 SUPERFAMILY PAP/OAS1 substrate-binding domain 219 397 - -
Lal17g0671 910 SUPERFAMILY Nucleotidyltransferase 66 237 IPR043519 -
Lal17g0671 910 MobiDBLite consensus disorder prediction 861 910 - -
Lal17g0671 910 Pfam Nucleotidyltransferase domain 113 170 IPR002934 GO:0016779
Lal17g0671 910 Gene3D - 196 400 - -
Lal17g0671 910 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 581 687 - -
Lal17g0671 910 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 52 536 - -
Lal17g0671 910 Gene3D Beta Polymerase, domain 2 93 195 IPR043519 -
Lal17g0671 910 MobiDBLite consensus disorder prediction 680 702 - -
Lal17g0671 910 MobiDBLite consensus disorder prediction 686 702 - -
Lal17g0671 910 PANTHER NUCLEOTIDYLTRANSFERASE DOMAIN PROTEIN 52 536 - -
Lal17g0671 910 PANTHER NUCLEOTIDYLTRANSFERASE DOMAIN PROTEIN 581 687 - -
Lal17g0671 910 MobiDBLite consensus disorder prediction 895 910 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0671 Lal-Chr17 4756275 4762738 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0671 - - lang:109337684 1487.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0671 17 4756275 4762738 Lal4g0477 4 3383537 3388765 LSH