Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0640 ATGAATGTGGACTGGTCGACTTGCCCCTTCTGTGATTTATGGCTTCCGTCATCCCAACTTCAATGGCACGCAAATGCTCACTTTGATGACCACGAAGATCTGCCCCAACAATTTCATCTTCCCTCAACTCCATCACCTCAATCTCTTCAGAGTGAACAAGCTGCCAGCGACTCGCAGTTCGGAGAAACATCGGGAGATTGTAATGATTGGTATGTTGGTGAGACCAGCAGAGATAATGGGGGATGCACAATGGATGACAAGGTGTCTTCCTTGATTGGTTTACAGGCAAGAAGCACATTTTACAAAGTTGAAGTGGGCTTGATGTCCTTGTTGAGAAACTGTTTGGAATCTGAACCTGAAAACTCAAAAGCCATTTTGTCAGGTTATGTTGATCATTTCCAGAGCCTTGAGTCCGAGGATGCGGGATGGGGTTGTGGTTGGCGTAACATTCAAATGCTTTGCTCTCACTTGCTAGTACAAAGACCAGAAGCAAGAGAAGCATTGTTTGGTAGTTCCGGATTTGTTCCAGATATCCCTTCACTCCAGAGATGGCTTGAGATTGCTTGGGAAAAGGATTTTGATGCAGCTGGATCTGCTCAATTTGATCATGTTATTTATGGTTCGAAAAAATGGATAGGAACTACTGAATGTGCCGCTCTTTTGCGTTCCTTTGCTCTTCGGGCTAGAGTCGTGGATTTTGGTCCTAAGGAATCTGTCCCAGGTTCAAGTGTTGATGGTGCTTTCGATAAAGCTAGTAGTGATAAGTTGGTCAAGAGTAATAATGCTAAGAAAAGTAAGGCCTATCAAGTTCTAATGGATTTTGTGTGGAATTACTTCTCTGATAAAAGCTCAATTCAATTTGATCATCAGCATGTTGTGATCAGTGAGAAAACGCCCTTGTACTTTCAACATGATGGTCATTCAAGAACAATAGTTGGAATACAAGTCGAACATCAACAGAATGGAATTTTGCAATATAATCTCCTAATTTTGGATCCTGCTCAGTGTACGGTTGCTCTTGAAAGGTCACTTAGAGAGAAAGTTGGCTGGCAGAAACTCATGAAAAGAGGAATGCATACTCTGGAGAAGCCACAATATCAGTTATGCTATGTTGATCCTGGAATTGCCAGTGGTGAGGAGATGGAAAAACTCAAGATCATCGATAGCGTCTTCCTTGAATTTTAG 1185 0.4236 MNVDWSTCPFCDLWLPSSQLQWHANAHFDDHEDLPQQFHLPSTPSPQSLQSEQAASDSQFGETSGDCNDWYVGETSRDNGGCTMDDKVSSLIGLQARSTFYKVEVGLMSLLRNCLESEPENSKAILSGYVDHFQSLESEDAGWGCGWRNIQMLCSHLLVQRPEAREALFGSSGFVPDIPSLQRWLEIAWEKDFDAAGSAQFDHVIYGSKKWIGTTECAALLRSFALRARVVDFGPKESVPGSSVDGAFDKASSDKLVKSNNAKKSKAYQVLMDFVWNYFSDKSSIQFDHQHVVISEKTPLYFQHDGHSRTIVGIQVEHQQNGILQYNLLILDPAQCTVALERSLREKVGWQKLMKRGMHTLEKPQYQLCYVDPGIASGEEMEKLKIIDSVFLEF 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0640 394 Pfam Peptidase family C78 122 369 IPR012462 -
Lal17g0640 394 MobiDBLite consensus disorder prediction 38 65 - -
Lal17g0640 394 MobiDBLite consensus disorder prediction 34 69 - -
Lal17g0640 394 PANTHER PEPTIDASE C78, UBIQUITIN MODIFIER-SPECIFIC PEPTIDASE 1/ 2-RELATED 5 394 - -
Lal17g0640 394 Gene3D - 110 374 - -
Lal17g0640 394 PANTHER ZINC FINGER PROTEIN 5 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0640 Lal-Chr17 4540778 4544597 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0640 K24134 - gmx:100781936 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0640 17 4540778 4544597 Lal17g0640 17 4540778 4544597 ECH