Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0630 ATGTCTCCAGGTCCAGTTGTTGAACCCGCCGCCGATGCCGGAGCCGACCAAGAACTCCTTTCCGCCGCTGAGGAAACTACTCTCAAGAAAAAACCTCTGTCTCAGGAATACGATGCTCCTGTTGTTGAAGATGTGAAGGATGAAGCTGAAGACGATGAAGATGACGACGAGGATGATGATGAGGATGACGGTGCTCAAGGTGACACTGAGGGTTCAAAACAAAGCAGAAGTGAGAAAAAGAGTCGAAAAGCAATGTTGAAGCTGGGATTAAAACCTGTTACTGGTGTTAGTAGGGTCACAATCAAGAGAACAAAAAATGTTCTCTTTTTCATCTCAAAGCCTGATGTCTTTAAGAGTCCAAATTCTGAGACCTACGTCATATTTGGGGAGGCAAAGATAGAGGACTTGAGCTCTCAGTTGCAGAACCAAGCTGCTCAGCAGTTCAGGATGCCAGACTTGCAATCTCTAACAGCAAAACAAGATCAAGGTGCTGCAGCTGCAGGAACACCAGCTGATGAGGAAGAAGAGGAGGTTGATGAAACTGGTGTAGCTCCCCATGACATTGATTTGGTCATGACACAGGCAGGAGTGTCAAGAAGCAAGGCTGTTAAGGCTCTCAAGACTCACGATGGTGACATTGTTGGTGCTATCATGGAGCTCACCACTTAG 669 0.4679 MSPGPVVEPAADAGADQELLSAAEETTLKKKPLSQEYDAPVVEDVKDEAEDDEDDDEDDDEDDGAQGDTEGSKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNVLFFISKPDVFKSPNSETYVIFGEAKIEDLSSQLQNQAAQQFRMPDLQSLTAKQDQGAAAAGTPADEEEEEVDETGVAPHDIDLVMTQAGVSRSKAVKALKTHDGDIVGAIMELTT 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0630 222 MobiDBLite consensus disorder prediction 43 66 - -
Lal17g0630 222 MobiDBLite consensus disorder prediction 1 84 - -
Lal17g0630 222 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 24 221 IPR016641 GO:0005854
Lal17g0630 222 Pfam HYPK UBA domain 182 221 IPR044034 -
Lal17g0630 222 Gene3D - 183 220 - -
Lal17g0630 222 MobiDBLite consensus disorder prediction 156 185 - -
Lal17g0630 222 SMART NAC_2 78 134 IPR002715 -
Lal17g0630 222 MobiDBLite consensus disorder prediction 23 42 - -
Lal17g0630 222 Gene3D - 84 137 IPR038187 -
Lal17g0630 222 Pfam NAC domain 78 133 IPR002715 -
Lal17g0630 222 PANTHER NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2 24 221 - -
Lal17g0630 222 CDD UBA_NAC_euk 185 221 - -
Lal17g0630 222 MobiDBLite consensus disorder prediction 67 84 - -
Lal17g0630 222 ProSiteProfiles NAC A/B domain profile. 75 140 IPR002715 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0630 Lal-Chr17 4472279 4477852 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0630 K03626 - gmx:100499943 270.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0630 17 4472279 4477852 Lal17g0630 17 4472279 4477852 ECH