Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0623 ATGTCCCCACCGCCACCACAACCACTCACAAACCTCCTACCTCAACCCCTCAATCTCCCATCCTTCCCAGATCTCTTCCTCACAGCCCTCTCCATACGCTTCATCTTCACCTCCTCCTCTTTCAAATCCACCCACCACGTCACCACCACGAAGTGCCCTTTTCTCTCTTTCCCTCTTAACCCTCGCCGCTTCCTCAAAATCCCCGCCATGTCCCGCTCCTCACCGGTATCAAACCCTCACAATAGAAGCCTCAACCTCAACGGCCTCATCCTCCTCCACCCTCCCCGCCGCCACGCCTTCGCGTCTCCGCAGTCCCTCTCCGATTGGCTCAAACCACGTCTCCCCTCCGATTCCTTCGCCTCGTGGGGCGTTAAACCGGGCACTAAGAACGTCCACAACCTCTGGCTCGAACTATCTGAAGGTGAAACCTCACTCGCTGACTCAACCCCTCCGGTTCGAACCGTTCAGGTCGTTACGGTCCGGGTTACCGGAAAAGATGGGGGCATTTTAATTGAGTCCTATCAGGAACTCTCTGATGGTAACGTTAGGAAGCGCGGAAGGCCCTTGTCGGAGAAGATGAAACCCGGTGAGGATCCTGAATCTGCGGCCGTGAGGGCCGTGAAGGAAGAGCTTGGGTCCATGATTGGTGGCGAGGTGGGTTGTGTTGTGAAGATTGATCCGAATTCGTATGGGATGAGGGTGGAGGAGCGGAATTCAGATTCTTATCCGGGTTTGCCTGGCTGCTATGTCTTGCACACGTTGAATGCCACGGTTGAAGGGTTGCCAGAGGGTGATTTTTGCACGTATGAGGTTGATGAGTATGGAGATTTTGTTGAGAAGAGAGTTTCTGATCAGGCTCTCTCTGTTAAGAAGCATTATTGGACATGGGTTAGTTCTGTTGATCTCACGAAACCATGA 918 0.5359 MSPPPPQPLTNLLPQPLNLPSFPDLFLTALSIRFIFTSSSFKSTHHVTTTKCPFLSFPLNPRRFLKIPAMSRSSPVSNPHNRSLNLNGLILLHPPRRHAFASPQSLSDWLKPRLPSDSFASWGVKPGTKNVHNLWLELSEGETSLADSTPPVRTVQVVTVRVTGKDGGILIESYQELSDGNVRKRGRPLSEKMKPGEDPESAAVRAVKEELGSMIGGEVGCVVKIDPNSYGMRVEERNSDSYPGLPGCYVLHTLNATVEGLPEGDFCTYEVDEYGDFVEKRVSDQALSVKKHYWTWVSSVDLTKP 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0623 305 CDD Nudix_Hydrolase 192 275 - -
Lal17g0623 305 MobiDBLite consensus disorder prediction 181 200 - -
Lal17g0623 305 PANTHER RING-H2 ZINC FINGER PROTEIN 3 301 - -
Lal17g0623 305 SUPERFAMILY Nudix 192 263 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0623 Lal-Chr17 4440705 4441622 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0623 - - lang:109328721 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0623 17 4440705 4441622 Lal17g0623 17 4440705 4441622 ECH
Lal17g0623 17 4440705 4441622 Lal21g0598 21 4504751 4505677 LSH