Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0619 ATGGCTACACTCTCTCTTCTTTCTCCACCTCACTTCTCAACAATAAACCTCACAACTTCCTTCACCCAAACCCTGAAAACCCCTTCTACCAATGCCACCTCACTCACCACCAACCACAACCGTGGTTCAATCTCCTCCGTTCGTATGTCATGGGACGGACCACTCTCTTCCGTCAAATTAATCACACAGGGCAAGAATCTAGAGCTCAGTGATGTGGTGAAGCAGCATATAGAGGAGAAGGTAGGAAAAGCGGTTCAGAAGCATAGCCACTTAGTTAGAGAGGTTGATGTGAGGCTATCTCTTAGAGGAGGAGGAGAATTTGGACGAGGACCCTTGATTCGTAGATGCGAAGTAACTTTGTTCACAAAAAGGCATGGAGTGATCCGGGCTGAGGAGGATGCAGAAACAATATATGGAAGTATAGATTTGGTGTCATCAATCATTCAAAGGAAGTTGAGGAAGATAAAGGAAAAGGAGTCAGACCATGGAAGACACATGAAGGGGTTCAACAGATTGAAGGTTAGGGAAGTAGTAGAACCGGTGCCCGTGGATGAGGATGAGATATCTCCACAAGAGGAGGAAGAATCAATTGAGGTTGTCCGAACAAAATTCTTCGACATGCCACCGTTGACCGTATCTGAAGCAATTGAGCAGCTCGAAAATGTTGATCATGACTTTTATGCTTTTCGAAATGAAGAAACTGGGGAGATTAATATTGTATACAAAAGAAAAGAAGGAGGTTATGGACTCATTATACCCAAAGGAGATGGTCAAGCAGAGAAATTGGAGCCCGTAGCTAAGGGAAGCTCCCTGAAAGAATGA 822 0.444 MATLSLLSPPHFSTINLTTSFTQTLKTPSTNATSLTTNHNRGSISSVRMSWDGPLSSVKLITQGKNLELSDVVKQHIEEKVGKAVQKHSHLVREVDVRLSLRGGGEFGRGPLIRRCEVTLFTKRHGVIRAEEDAETIYGSIDLVSSIIQRKLRKIKEKESDHGRHMKGFNRLKVREVVEPVPVDEDEISPQEEEESIEVVRTKFFDMPPLTVSEAIEQLENVDHDFYAFRNEETGEINIVYKRKEGGYGLIIPKGDGQAEKLEPVAKGSSLKE 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0619 273 CDD RaiA 59 158 IPR003489 GO:0044238
Lal17g0619 273 PANTHER 30S RIBOSOMAL PROTEIN 43 257 - -
Lal17g0619 273 Gene3D - 59 163 IPR036567 -
Lal17g0619 273 SUPERFAMILY Ribosome binding protein Y (YfiA homologue) 60 165 IPR036567 -
Lal17g0619 273 Pfam Sigma 54 modulation protein / S30EA ribosomal protein 61 158 IPR003489 GO:0044238
Lal17g0619 273 PANTHER 30S RIBOSOMAL PROTEIN 43 257 - -
Lal17g0619 273 Hamap Ribosome hibernation promoting factor [hpf]. 58 254 IPR034694 -
Lal17g0619 273 TIGRFAM yfiA: ribosomal subunit interface protein 60 163 IPR003489 GO:0044238
Lal17g0619 273 Gene3D - 209 259 IPR038416 -
Lal17g0619 273 Pfam Sigma 54 modulation/S30EA ribosomal protein C terminus 195 250 IPR032528 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0619 - - gmx:100803327 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0619 17 4418840 4421681 Lal17g0619 17 4418840 4421681 ECH