Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0604 ATGGCTCAAACACTATCCTTAACTACTGCTTCACCTATGCTACCTCAAAAAGTAGGGTATTCTACAAAACCATGCAAGAAAGTAGTTATTTCACCCAGCTTAGCCTTTTTTCCAATATCAAAGAGAGCTTTGCCAAGGGTGATAGCTCAGGCCAATAGTGACAACAAGGATAATTCTTTGGACGTGCATGTTAGCAAGGGAGAACAAGGTATCTCAATGGAGAAAAGGCCACGCAGGTCTGCCACTGAAATTTCACCATTTGGTGTATTGGACCCATGGTCACCTATGAGGAGCATGCGCCAGATGCTAGACACAATGGACCGAATTTTCGAAGATACCATGGCATTCCCTGTAAGAAACCTAGGAGGAGGTGAGATTCGAGCTCCTTGGGACATTAAAGAAGAAGAGCAAGAAATCAAAATGCGGTTCGACATGCCCGGTCTTTCCAAGGAAGATGTGAAGGTCTCTGTGGAAGACAATGTGCTTGTTATAAAAGGTGGCCATAAGAATGAACAAGGTGGTGGTGATTCTTGGTCAAGCAAGACTTATAGTTCTTATGATACTCGTCTAATGATCCCAGATAATTGTGAGAATGATAAGGTTAAGGCTGAGTTGAAAAATGGTGTGCTTTACATCACTATTCCTAAGACCAAAGTTGAGCGTAAGGTTATTGATGTGGAAATTCAGTGA 690 0.4232 MAQTLSLTTASPMLPQKVGYSTKPCKKVVISPSLAFFPISKRALPRVIAQANSDNKDNSLDVHVSKGEQGISMEKRPRRSATEISPFGVLDPWSPMRSMRQMLDTMDRIFEDTMAFPVRNLGGGEIRAPWDIKEEEQEIKMRFDMPGLSKEDVKVSVEDNVLVIKGGHKNEQGGGDSWSSKTYSSYDTRLMIPDNCENDKVKAELKNGVLYITIPKTKVERKVIDVEIQ 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0604 229 Pfam Hsp20/alpha crystallin family 131 229 IPR002068 -
Lal17g0604 229 PANTHER HEAT SHOCK PROTEIN 21, CHLOROPLASTIC 1 229 - -
Lal17g0604 229 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 229 IPR044587 GO:0009408
Lal17g0604 229 Gene3D - 88 229 IPR008978 -
Lal17g0604 229 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 121 229 IPR002068 -
Lal17g0604 229 CDD ACD_sHsps-like 131 216 - -
Lal17g0604 229 SUPERFAMILY HSP20-like chaperones 106 228 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0604 Lal-Chr17 4333636 4334799 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0604 K13993 - gmx:548078 332.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0604 17 4333636 4334799 Lal17g0604 17 4333636 4334799 ECH