Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0596 ATGGCTTCTACCACATCATCACGCACATTTCTCTCCAACACTACTCGAACCCCATTCTCTTATTCTACACATACCCAACCACCCCGCAATTTCTTCTCTCACTCTTTGAGGTTAAAAAATGTTTCTTTATCATCTCACTCTACCTTTAAACCCAACATTACTCTTCTCTGTAAAGTCAAAGGGTTTTCCATGGCGGAGACCACAAACAATAACAACGTTGTTGTTGGGGTTTTCGATAAGGAGTACCTTGCTGTGTCTTTGGCTCAATACGTCGCTAATTTATCTAATAAGTTCATCAATCAAAGAGGGGCTTTTACTGTCACATTGTCTGGTGGTTCCTTGATCAATTATCTCAGGAAACTTCTGGAACCTCCTTATGTTGATACTCTGGAATGGTCTAAATGGCATGTGTTTTGGGTGGATGAGAGAGTTGTGCCAAAAACTCATGAAGATAGTAACTACAAGCTTGCTTATGAAGGATTCCTCTCCAAGGTGCCCATTCTTCCTGGCAATGTTTATTCGATAAATGATGCCCTGTCAGCTGAGGGAGCAGCAGATGATTATGAGACATGTATTAGACACTTGGTCAAGAGCAACGTGATAGCTTCATCATCGAGCGGATTTCCAAAGTTTGATCTTCAGCTACTTGGTATGGGCCCTGATGGGCACGTAGCTTCGTTGTTCCCCGGACATCCTCTTGTGGAGGAGGATAAAAAATGGGTTACCTTCGTTAAGGACTCGCCAAAACCGCCTTCAGAGAGAATCACTTTCACCTTTCCAGTGATCAATTCTTCTGCTTACGCAGCGCTCGTGGTCACCGGTGCTGGTAAAGCAGATGCAGTTCATTCTGCGCTGCGCGTATCTGAGAATTCCGAAAAGCTTCCTGTTGCATTGGTTTCACCCGAAGATGAGTTGAAATGGTTCTTAGACAAAGATGCAGCATCAAAGCTGTAA 954 0.4371 MASTTSSRTFLSNTTRTPFSYSTHTQPPRNFFSHSLRLKNVSLSSHSTFKPNITLLCKVKGFSMAETTNNNNVVVGVFDKEYLAVSLAQYVANLSNKFINQRGAFTVTLSGGSLINYLRKLLEPPYVDTLEWSKWHVFWVDERVVPKTHEDSNYKLAYEGFLSKVPILPGNVYSINDALSAEGAADDYETCIRHLVKSNVIASSSSGFPKFDLQLLGMGPDGHVASLFPGHPLVEEDKKWVTFVKDSPKPPSERITFTFPVINSSAYAALVVTGAGKADAVHSALRVSENSEKLPVALVSPEDELKWFLDKDAASKL 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0596 317 PANTHER 6-PHOSPHOGLUCONOLACTONASE 40 317 IPR039104 -
Lal17g0596 317 PANTHER 6-PHOSPHOGLUCONOLACTONASE 3, CHLOROPLASTIC 40 317 - -
Lal17g0596 317 CDD 6PGL 81 309 IPR005900 GO:0005975|GO:0006098|GO:0017057
Lal17g0596 317 SUPERFAMILY NagB/RpiA/CoA transferase-like 79 317 IPR037171 -
Lal17g0596 317 Pfam Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 79 305 IPR006148 GO:0005975
Lal17g0596 317 TIGRFAM pgl: 6-phosphogluconolactonase 80 317 IPR005900 GO:0005975|GO:0006098|GO:0017057
Lal17g0596 317 Gene3D - 67 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0596 Lal-Chr17 4267863 4271318 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0596 K01057 - gmx:100794078 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0596 17 4267863 4271318 Lal17g0596 17 4267863 4271318 ECH