Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0587 ATGGAGTTATTCTATTACACCGTGTTCGGTGGTTTGGCCGCGGTGGTGGCAGTTTTGGAGTTGAGCAAGAACAATAAGGATCGAATCAACACTTCTTCAGCTTTCAATTCCTTCAAGAACAGTTACCTTCTCGTTTATTCTCTTATGATGGCTGGAGATTGGTTGCAAGGTCCATATGTATACTACCTTTACAGTACATATGGATATGGGAAAGGAGAGATAGGACAACTATTCATTGCTGGTTTTGGATCTTCCATGTTGTTTGGAACAATTGTGGGATCTCTAGCTGACAAACAGGGTCGAAAGAGGGCTTGCGTGACTTACTGCATAACCTACATTTTGAGTTGTATCACCAAACATTCTCCTCAATACAAAGTATTGATGTTGGGGCGTATTTTGGGAGGTATTGCCACATCACTTCTGTTTTCAGCATTTGAGTCATGGCTAGTTGCTGAACACAACAAGAGGGGCTTCGAACAACAATGGCTATCATTAACATTCTCAAAGGCTATATTTCTCGGAAATGGTCTTGTTGCCATTGTGGCTGGGCTGTTTGGAAATGTCCTTGTTGATACATTGGCTCTTGGACCCGTGGCCCCCTTTGATGCTGCTTCATGTTTTCTTGCTATTGGTATGGCTGTGATCCTATCTTCATGGACAGAAAATTATGGAGATCCTTCTGAGAATAAGGACTTGCTTACCCAATTCAGGGGTGCTGCTGTGGCCATTGCTTCTGATGAAAAAATTGCCTTGCTTGGAGCAATCCAGTCTCTCTTTGAAGGTTCGATGTATACCTTTGTGTTCCTATGGACCCCTGCATTGAGCCCAAATGATGAAGAGATTCCCCATGGTTTTATTTTTGCAACATTCATGTTATCTTCAATGTTGGGAAGCTCAGTTGCATCAAAGCTGATGGCCCGTTCAGCACTTCGGGTAGAGAGCTACATGCAGCTTGTTTTTGCTGTTTCTTCTGCTGCTTTGCTGCTTCCCATTCTGACCACTTTCTTGGTAGTCCCTACCAAAGTGAAAGGTGGAAGCATCTCATTTGCTGGTTGTGTTCAACTTCTTGGCTTCTGTGTTTTTGAGGGTTGTGTTGGCATATTTTGGCCATCTATTATGAAGATGAGATCTCAATACATCCCCGAGGAGGCCAGGAGCACCATCATGAACTTTTTCCGTGTTCCTCTGAACATTTTTGTGTGTGTTGTGCTATATAATGTTGATGCATTCCCTATCACTGTTATGTTTGGAATGTGCTCAATTTTCCTTGTGGTGGCATGTATCTTACAAAGGCGACTGATGGTGATTGCAGAAAAGCCAAAAACAGAAGATTGGCAACTAAAGGAAAGGGACAGTGAGACAGAGCCATTGAACATCTGA 1380 0.4297 MELFYYTVFGGLAAVVAVLELSKNNKDRINTSSAFNSFKNSYLLVYSLMMAGDWLQGPYVYYLYSTYGYGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCITKHSPQYKVLMLGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSLTFSKAIFLGNGLVAIVAGLFGNVLVDTLALGPVAPFDAASCFLAIGMAVILSSWTENYGDPSENKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLSSMLGSSVASKLMARSALRVESYMQLVFAVSSAALLLPILTTFLVVPTKVKGGSISFAGCVQLLGFCVFEGCVGIFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCVVLYNVDAFPITVMFGMCSIFLVVACILQRRLMVIAEKPKTEDWQLKERDSETEPLNI 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0587 459 Gene3D MFS general substrate transporter like domains 41 432 IPR036259 -
Lal17g0587 459 PANTHER SAM (S-ADENOSYL METHIONINE) TRANSPORTER 1 459 IPR008509 GO:0015098|GO:0015689|GO:0016021
Lal17g0587 459 SUPERFAMILY MFS general substrate transporter 42 449 IPR036259 -
Lal17g0587 459 Pfam Sugar-tranasporters, 12 TM 4 358 IPR008509 GO:0015098|GO:0015689|GO:0016021
Lal17g0587 459 CDD MFS_MFSD5_like 35 431 - -
Lal17g0587 459 PANTHER MOLYBDATE-ANION TRANSPORTER 1 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0587 Lal-Chr17 4195729 4206702 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0587 K24175 - gmx:100799378 851.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0587 17 4195729 4206702 Lal4g0514 4 3725070 3730318 ECH
Lal17g0587 17 4195729 4206702 Lal17g0587 17 4195729 4206702 ECH