Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0584 ATGGCTAAGACGAAGAGTAAAAACCATGTTTCTCTCCATGATGATATCATTTCCAAGGCTTTTCAGAAAGTGACTATCACTAAGGATGTCTATTGGCACTCTAGCTGTGACTGTCACTGTGTTTTTCGACGGATAGTTATCATCACAGAGAGGACATTTGTTGTTGTTGCAAAACAGCATTTTAAATTGTTGTGTGAAGACAATGACATTGTTACCTGTTTCAAAGACGAAAACGAATTCCATGGGATCTTTGTTTTCTCAGTTGGACTTCATGGAAGAAGTGGCCGAGGGTTTCTGTTTTCCCATGCAATGAATATTGTCACAGGGCCAAAAGAAGACAGGCACCTCACGACTGGCCTCCACACCGTTGCTGATGTTCATTGCGGTGATTGCCGTGAAGTGTTGGGTTGGAAGTATGAGAGAGCTTATGAAGCATCTCAGAAATACAAGGAAGGAAAATTCATACTTGAAAAGTCAAAAATTGTTAAGGAAAACTGGTAG 501 0.4072 MAKTKSKNHVSLHDDIISKAFQKVTITKDVYWHSSCDCHCVFRRIVIITERTFVVVAKQHFKLLCEDNDIVTCFKDENEFHGIFVFSVGLHGRSGRGFLFSHAMNIVTGPKEDRHLTTGLHTVADVHCGDCREVLGWKYERAYEASQKYKEGKFILEKSKIVKENW 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0584 166 ProSiteProfiles Yippee domain profile. 67 165 IPR034751 -
Lal17g0584 166 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 94 162 IPR004910 -
Lal17g0584 166 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 75 166 IPR039058 -
Lal17g0584 166 PANTHER PROTEIN YIPPEE-LIKE 75 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0584 Lal-Chr17 4172182 4175196 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0584 - - gmx:100800980 159.458
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0625 6 4043884 4045272 Lal17g0584 17 4172182 4175196 ECH
Lal17g0584 17 4172182 4175196 Lal17g0584 17 4172182 4175196 ECH