Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0581 ATGGCCAACGTTTCAATTCCACTCCCACAACACGGTTTCTCCATACACTATTCCTCAACCAAGCGCTTATGTTTCAAGACTTCACCTTCAATACTCAGAGTCTCTTCTTATGGAGTGGGTGAGTTAGATGAATCTGGGAATAAGAGCGAGTTATTTAATTTCAATGGGATTAAGGGTGTGGCGTGTGGTATTCTTGCAGCTTGTGTTGTGAATTCTGCTGCATTTCCTGTTACTGCTGCTGGTCAGAGGCTGCCACCGTTGTCAACTGATCCCGACCGCTGCGAGCGTGCATTCGTAGGAAACACAATTGGTCAAGCAAATGGTGTATATGACAAACCATTAGATCTTCGGCTTTGTGATTTCACTAATGAAAAAACCAACCTTAAGGGGAAGACTTTGTCTGCAGCACTCATGTCAGATGCTAAGTTTGATGGTGCTGACATGACTGAAGTTGTAATGTCAAAGGCTTATGCTGTTGGTGCAAGCTTTAAAGGTGTGGACTTCTCAAATGCGGTGTTGGACCGTGTTAACTTCGGGAAAGCTGATCTTCAAGGAGCTGTATTCAAGAACACAGTTTTGTCAGGATCAACCTTTGAAGATGCTAAGCTAGAAGGTGTAGATTTTGAGGACACTATCATAGGTTATGTTGATCTTCAGAAGCTTTGCTTAAATAAGACCATAAATGATGAAACAAGAGCTGAACTAGGATGTAGATGA 717 0.4254 MANVSIPLPQHGFSIHYSSTKRLCFKTSPSILRVSSYGVGELDESGNKSELFNFNGIKGVACGILAACVVNSAAFPVTAAGQRLPPLSTDPDRCERAFVGNTIGQANGVYDKPLDLRLCDFTNEKTNLKGKTLSAALMSDAKFDGADMTEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKADLQGAVFKNTVLSGSTFEDAKLEGVDFEDTIIGYVDLQKLCLNKTINDETRAELGCR 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0581 238 Gene3D - 112 238 - -
Lal17g0581 238 SUPERFAMILY Pentapeptide repeat-like 117 225 - -
Lal17g0581 238 Pfam Pentapeptide repeats (8 copies) 133 170 IPR001646 -
Lal17g0581 238 Pfam Pentapeptide repeats (8 copies) 173 210 IPR001646 -
Lal17g0581 238 PANTHER THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC 1 238 - -
Lal17g0581 238 PANTHER THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC 1 238 IPR044195 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0581 - - gmx:100801521 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0581 17 4132923 4136011 Lal17g0581 17 4132923 4136011 ECH