Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0572 ATGATAATGGGAGAGAAAGAACTTTCTTTTTTGGATAGAATTGGATATGACAAGAGTGAAACTGAAAACATGTATCCCATGTATTTTGGTATTTCTTGTGCATTCTTTGCCATCCAAATCCTAACAAAACCACATGTTGAAGTCGAAAGATTATCGGAGATTCGCGATAGCATACTTCAAGGAAGTGCTCAACTTCTGGGCTTGATTGTGTGGAAAGTTCAAAAGGGGGTGCCAAGTGAAGGAGATAGCAACAACAAACTCCTTTTCAAGCTTAAAAGTGCTGAGAGAGAAATTGAGAATCTGAAAAGGATGAGACATGAGGATGCCAAGGCTAATGAGAAAGTTGTTGGAATATTTGCTGCACAAGAGCAAAGCTGGTTTAGTGAAAGGAGGAAGCTGAGACAACAAATTGGGGCTCTATTGAATGAATTGAAAGTTTTTGAGAGAAAAAAGGATGCAGAAATTTCTGAATTGAATCAGAAGTTGAAGGAAATGGTGGAGTGTAGAGACAAGGTGACTGAAGAAGAGGAGCAGAAGAGGAAGGAGCTGGAAGAAAAGCTAACAAAAGCTGAAAGGGATGCAGAAGAATTAAGAGAAACTGTTAAGCATGAGGCTCAAGAGCATTCTTCTGATCTTAGGAAGCACAAATCTGCTTTTGTAGAATTGGTGTCAAACCAAAGACAGATTGAGGCCGAACTCGGGCGCGCAGTGAAACAAGTGCAAGCCTCAAAACAGGAGCTTTGTTCAGTGTTGGAGCAGAAGGAGGAGTCAGATTTGATGGCACAAAAATTATCAATGGAGATTACCAAGTTGCACAAGGATTTGGTACAAAAGGATCAAATTTTGTCAGCAATGTTGAGAAAGTGTAAGCTGGACACTGCAGAAAAGCAAATGCTATTAAAGGAGGTTAAGTTATCAAAGGCTAGAAGGAAACAAGCTGAGCATGAAACAGAAAAGTGGAGGGCAGTTTCAGAAGGAAAACATGACAGACATTCTTTAAAAAGCATGTTGGTTAACTTGAGTTCAAGAATGGATGTTTTCCCTGGTGCTAAAGCTATGCAACATAGTTCAATAGGGTCATCAAATATTGTAAAGGAACCAGACCATTTTTCACCCTTTTCTGATCATCAGAACTTGCCACAAAGAAATAATGAGTTGTCCATTCCTGCAAATACTCAGCGCTTGGAACATTGGATGCGAGCCGAGGCAGAAAGATATGCAACTCTGATTGAACAAAGACATAACTTAGAGTTGGATGCTTTTGCAGATCAAATGAGACTCAAAGATGAGAAATTAGAGGCATTTCGTTGGCAGTTGTTGCGAATGGAATTAGAAATGAAGCAGCTGCAGTCTCATGTAGAGGAATTGGTGAAGGATGTGACACAGCTAAGACATGAGAAGATCAAATTAGAGGCCTTACTGATGGAGAGAGAAGATGAGATAACTTCTATAAAAGAGCAATTTGCATCACAATTACGGCCGTTAAACAGCTTTAGAAATCACTCATTTTTGCCTCCACAATCTTCAGAACTATCCCAAGATGCTGTCTGGTCCAAAGTTAAGGTTGTCAAGAGAAAACCAAGTGAAAAGGAGCAACCAATTATTGAAACCTTGATTCAGGAAGATTGTGAAAAAGAAGTACAACACTTGACACATGGCCAGCATAATCCTAATTTAGTATTCCAATCTCCAGAGAATGAAATTGAAGAAGAAAAGCATGTTTCTAGGGAGGAAAGTCCTATGCAAATTCTTAGTCCAAATCAAATAGAAGTTGCTGTTTCAGAAAAGACAGCATCTACTAGCCAACCCTTTAATAACACAAAACAGTCACCATGGAAGATGGACCTGCATGCTCTTGGTGTTTCTTACAAGATAAAAAGGCTCAAGCAGCAACTTGTTCTTGTCGAAAGGTTGACCGAAAGGCAAGCTAATGATGAACATGCAGAAACTAGTGATGGAAGCAATGTTGGCATGAAGGCTTATCTGTCCTTGACTACTTTGCTGAGTAAACAAGTTGGAAGATACCAAACCCTTCAAGAGAAAACAGATGATCTTTGCAGACGGATGCATGAGAATGATCTGTATGCAAATCGAGGCGATTTCAACTCTGCAAGAAAAAAGGAGAAAGCATCAACACTGGAACATTTCCTAGAGGAAATATTTCAATTGCAGAGGTACATAGTTGCAACAGGACAAAAAATGATGGAACTCCAATCAAAGGTTGTTTCTGTTTTTGTTGGAGTGGCAGAAGAGATGGAGAAAAATGCTGGTATTGACATGAAACGTTTTGGTGATAGTATTAGAAACATGTTCCAAGAAGTTCAAAGAGGTCTTGAAGTTAGAACAGCTAGAATTATAGGAGATCTTGAAGGAACACTAGCTCGTGAAGGAATCATATGTTGGAGAAGGTAG 2412 0.3939 MIMGEKELSFLDRIGYDKSETENMYPMYFGISCAFFAIQILTKPHVEVERLSEIRDSILQGSAQLLGLIVWKVQKGVPSEGDSNNKLLFKLKSAEREIENLKRMRHEDAKANEKVVGIFAAQEQSWFSERRKLRQQIGALLNELKVFERKKDAEISELNQKLKEMVECRDKVTEEEEQKRKELEEKLTKAERDAEELRETVKHEAQEHSSDLRKHKSAFVELVSNQRQIEAELGRAVKQVQASKQELCSVLEQKEESDLMAQKLSMEITKLHKDLVQKDQILSAMLRKCKLDTAEKQMLLKEVKLSKARRKQAEHETEKWRAVSEGKHDRHSLKSMLVNLSSRMDVFPGAKAMQHSSIGSSNIVKEPDHFSPFSDHQNLPQRNNELSIPANTQRLEHWMRAEAERYATLIEQRHNLELDAFADQMRLKDEKLEAFRWQLLRMELEMKQLQSHVEELVKDVTQLRHEKIKLEALLMEREDEITSIKEQFASQLRPLNSFRNHSFLPPQSSELSQDAVWSKVKVVKRKPSEKEQPIIETLIQEDCEKEVQHLTHGQHNPNLVFQSPENEIEEEKHVSREESPMQILSPNQIEVAVSEKTASTSQPFNNTKQSPWKMDLHALGVSYKIKRLKQQLVLVERLTERQANDEHAETSDGSNVGMKAYLSLTTLLSKQVGRYQTLQEKTDDLCRRMHENDLYANRGDFNSARKKEKASTLEHFLEEIFQLQRYIVATGQKMMELQSKVVSVFVGVAEEMEKNAGIDMKRFGDSIRNMFQEVQRGLEVRTARIIGDLEGTLAREGIICWRR 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0572 803 MobiDBLite consensus disorder prediction 171 212 - -
Lal17g0572 803 PANTHER RIBONUCLEASE P PROTEIN SUBUNIT P38-LIKE PROTEIN 17 802 - -
Lal17g0572 803 Coils Coil 439 480 - -
Lal17g0572 803 Coils Coil 291 316 - -
Lal17g0572 803 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Lal17g0572 803 Coils Coil 130 150 - -
Lal17g0572 803 Coils Coil 84 114 - -
Lal17g0572 803 Coils Coil 155 207 - -
Lal17g0572 803 PANTHER RIBONUCLEASE P PROTEIN SUBUNIT P38-LIKE PROTEIN 17 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0572 Lal-Chr17 4072355 4076257 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0572 - - gmx:100815082 1176.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0572 17 4072355 4076257 Lal17g0572 17 4072355 4076257 ECH