Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0571 ATGATTTCAAATCCAGAGTTAATTCACTATGCATGCATTGCAAAACAAACCACAATCCTTGCTCAACACAACACCACCAATGATCCAAAAATCGAATCTTTAGCATCACAATGCATCGAACAAACCCCACCCAATCACTCTCTCTTCTCTCACACCCACAACAATCGCACTTTCACCTTCCTCATCGATTCCCCTTTCACTTTCTTCGCCATCTTCAACAACCTCACCCTCAAATCCGAAACCCTAGCTTTTCTCAACGCCGTCAAAACCGCTTCCCGCGGTGCCCTCGACCACCAGATCCAAGATTCCGCCGATCTCCACCCGCTGTGTTTCCAGCCCCAATTCGATTCGATTCTCAAAGAAACCCTCGATTTGGGATCAGAATTGACGGGGAATTCGTCGAATTCGATTGTGATTGACCGCGATTGTGGAAACCCTAGGGGGAAGCGTCCCTCGACGGTGCCGCTACTGGGGAAGCCGCTGGAGGGGTTGAAGAAGAAGAAGAGGGTGGTGGGTTCGGATTTGGAGGGTAAAGATGGTAACTTGGAGAACAAGGTGGAAGTTTCTGATTCTGAGTTTAATTTTTGTAATAGGGATTTGAAGGGAATGGTTAATGATCATCGCCAAAAGGCGAAGCATATTTGGAAGAAACATGTTTGGGTTGTGTTGCTACTTGATTTGTTTGTCTGTGCTGTTTTGTTCGTTATTTGGTTATGGGTTTGCAGTGGTTTCAAGTGCATGGCTTATTGA 750 0.4613 MISNPELIHYACIAKQTTILAQHNTTNDPKIESLASQCIEQTPPNHSLFSHTHNNRTFTFLIDSPFTFFAIFNNLTLKSETLAFLNAVKTASRGALDHQIQDSADLHPLCFQPQFDSILKETLDLGSELTGNSSNSIVIDRDCGNPRGKRPSTVPLLGKPLEGLKKKKRVVGSDLEGKDGNLENKVEVSDSEFNFCNRDLKGMVNDHRQKAKHIWKKHVWVVLLLDLFVCAVLFVIWLWVCSGFKCMAY 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0571 249 PANTHER PHYTOLONGIN PHYL1.2 1 248 IPR044783 GO:0016021
Lal17g0571 249 PANTHER PHYTOLONGIN PHYL2.2 1 248 - -
Lal17g0571 249 CDD Longin 10 124 IPR010908 -
Lal17g0571 249 SUPERFAMILY SNARE-like 8 122 IPR011012 -
Lal17g0571 249 Gene3D Longin domain 2 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0571 Lal-Chr17 4068743 4069492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0571 10 246 Miscellaneous Gene Families AT3G54300 23.265 7.87e-15 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0571 - - lang:109328143 484.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0571 17 4068743 4069492 Lal17g0571 17 4068743 4069492 ECH
Lal17g0571 17 4068743 4069492 Lal4g0498 4 3578389 3579117 LSH