Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0522 ATGGCAACAGTCTTGTCCACAATCTGCGTGCTTCCTTTGAGGAATCCACAGCACATGTCTATCCCACCCTCACGAATACTTTGCCACTCTTCAGTCTCAAAAGATAGTTGTATGATAAATAGTGGAGAAAGCAAGAAACTTTCCTCTTTGTTGGTGAACAGAAGAACCCTTTTGGCTTCTGGAGTTTCCTTGTTGGGTTTTCAAGGAGAGAGTTTGGCGGTGGTGAAACAAGGACTTCTAGCTGGTAGAATTCCTGGTCTATCAGAACCAGATGAACAAGGTTGGAGGACATATCGGAGGCCGGATGAGAAGTCAGGAGGACATGGTGTTGGATGGAGTCCTATTATCCCATACAGCTTCTCAGTGCCTCAAGAATGGGAAGAGGTACCGGTATCAATAGCAGATCTCGGTGGCACAGAGATAGATTTGAGATTTTCGAGCTCTAAGGAAGGACGCCTATTTGTCATTGTTGCTCCTGTTCTTAGATTCTCTGATGATCTTGGCGATGATGCTAAAATAGAACAAATTGGACCTCCAGACAAAGTGATCAATGCCTTTGGTCCAGAAGTGATCGGGGAAAATGTAGAAGGGAAGGTTCTCAGCGCAAGTGCCGAAGAACACGAAGGAAGAACTTACTACCAGTTTGAGTTGGAGCCGCCTCATGTTCTTATTACTGCTACTGCAGCTGGCAATCGCCTATACTTGCTCGGTGTAACAGGCAGTGGTCTTCAGTGGAAGAGACACTACAATGATTTGAAAAAAATAGCCGAGTCTTTTCGAATTGTATAA 789 0.4487 MATVLSTICVLPLRNPQHMSIPPSRILCHSSVSKDSCMINSGESKKLSSLLVNRRTLLASGVSLLGFQGESLAVVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYSFSVPQEWEEVPVSIADLGGTEIDLRFSSSKEGRLFVIVAPVLRFSDDLGDDAKIEQIGPPDKVINAFGPEVIGENVEGKVLSASAEEHEGRTYYQFELEPPHVLITATAAGNRLYLLGVTGSGLQWKRHYNDLKKIAESFRIV 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0522 262 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 115 261 - -
Lal17g0522 262 PANTHER - 30 262 - -
Lal17g0522 262 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 30 262 - -
Lal17g0522 262 Pfam PsbP 118 261 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Lal17g0522 262 SUPERFAMILY Mog1p/PsbP-like 110 261 IPR016123 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0522 - - gmx:100785447 429.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0522 17 3630996 3633207 Lal17g0522 17 3630996 3633207 ECH