Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0513 ATGGCTACAGTTTGTTGGCCATATTTTGATCCTGAGTATGAGAACTTCAGCAATAGACTCAACCCTCCAAGGGTCTCTGTGGACAATGCTAGTTGCCATGATTGTACACTGATCAAGGTTGACAGTGTTAACAAACCTGGAATTCTGCTGGAAGTTGTGCAAATCTTGACAGACCTTGAGTTCATAATTACAAAAGCGTATATATCTTCCGATGGAGGATGGTTTATGGATGTGTTTCATGTCACGGATCAACAAGGAAAGAAGATAACAGATAGTAAGACCATTGACATCATTGAAAAGGCTCTAGGACCAAAGGGCCAGAGCAAAGAAGGAGCGAAGAGTTGGACAGGCAAACGGGTTGGGGTGCATTCTGTTGGTGACCATACAGCCATTGAGCTCATTGGGAGAGACCGCCCGGGTCTCTTGTCCGAGATTTCAGCTGTTCTTGCCAGCCTTGATTTTAATGTGGTTGCAGCTGAAGTTTGGACTCATAACCAGCGAATAGCATGCGTCCTTTATATCAATGATGCTACAAATCAAGTTGTGGATGATCCAAAAAGATTATCTCTTATCGAGGAGCAGCTCAACAATATCTTGCGTGGGTGTGAGGATGGTGAGAAAGTTGCTAGGACCAGTTTCTCTGTGGGTTTCACTCATATGGACAGGCGGCTCCATCAAATGTTGTTTGCTGATCGAGATTATGAAGGTTCTGGAGTAACAACAGAAGTTGATAATCCTCCTTTTTTCAAGCCAAAAATCACAATAGAATGTTGTGAGGAAAAAGGGTATTCGGTGGTTAGTGTCCGGTGCAAAGATCGGGCAAAACTCATGTTTGACATTGTCTGCACTCTTACTGACATGCAATATGTTGTTTTCCATGCCACGATCTCATCAGATGTCCCTTATGCATCCCAGGTATATTACATTAGTAATCTTGGAAGCAACCTCTTGCTTGCAAAGGAATACTTTATTCGACACATGGATGGATGCACGCTTGATACCGAAGGAGAGAAAGAAAGGGTCATCAAATGCATTGAAGCTGCTATTAGAAGAAGAGTAAGCGAGGGTGTGAGCCTAGAGCTGTGTGCAAAGGATAGAGTCGGCTTGCTGTCCGAAGTAACGAGGATTCTGAGAGAAAATGGTTTGACAGTGTGTAGGGCAGGTGTATCCACCAGAGGGGAACAGGCATTGAATGTCTTCTATGTGAGGGATGCTTCAGGAAACCCGATGGACATGAAAATGATCGAAGCTCTTCGTAAAGAAATCGGTAAGACAATGATGGTGGATGTGAAGAGGGTGCCAGCCAATGCCAAAGCACCAGAAACAAAAGGATGGGCTAAAACTAGCTTCTTCTTTGGTAACTTGTTGGAGAAGTTCTTGAATTGA 1386 0.438 MATVCWPYFDPEYENFSNRLNPPRVSVDNASCHDCTLIKVDSVNKPGILLEVVQILTDLEFIITKAYISSDGGWFMDVFHVTDQQGKKITDSKTIDIIEKALGPKGQSKEGAKSWTGKRVGVHSVGDHTAIELIGRDRPGLLSEISAVLASLDFNVVAAEVWTHNQRIACVLYINDATNQVVDDPKRLSLIEEQLNNILRGCEDGEKVARTSFSVGFTHMDRRLHQMLFADRDYEGSGVTTEVDNPPFFKPKITIECCEEKGYSVVSVRCKDRAKLMFDIVCTLTDMQYVVFHATISSDVPYASQVYYISNLGSNLLLAKEYFIRHMDGCTLDTEGEKERVIKCIEAAIRRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVCRAGVSTRGEQALNVFYVRDASGNPMDMKMIEALRKEIGKTMMVDVKRVPANAKAPETKGWAKTSFFFGNLLEKFLN 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0513 461 SUPERFAMILY ACT-like 32 106 IPR045865 -
Lal17g0513 461 SUPERFAMILY ACT-like 125 200 IPR045865 -
Lal17g0513 461 ProSiteProfiles ACT domain profile. 358 435 IPR002912 -
Lal17g0513 461 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 4 460 - -
Lal17g0513 461 CDD ACT_ACR_1 35 106 - -
Lal17g0513 461 Pfam ACT domain 37 85 IPR002912 -
Lal17g0513 461 Pfam ACT domain 130 199 IPR002912 -
Lal17g0513 461 SUPERFAMILY ACT-like 354 424 IPR045865 -
Lal17g0513 461 Gene3D - 128 210 - -
Lal17g0513 461 ProSiteProfiles ACT domain profile. 130 210 IPR002912 -
Lal17g0513 461 CDD ACT_ACR_3 263 352 - -
Lal17g0513 461 CDD ACT_ACR_4 356 427 - -
Lal17g0513 461 Gene3D - 353 434 - -
Lal17g0513 461 ProSiteProfiles ACT domain profile. 37 122 IPR002912 -
Lal17g0513 461 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 4 460 IPR040217 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0513 Lal-Chr17 3559663 3567252 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0513 - - gmx:100789173 795.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0513 17 3559663 3567252 Lal17g0513 17 3559663 3567252 ECH