Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0508 ATGGTTGTGGGAAGGAATTTCCGAGGCGAAGGGAAGAAGCCATCAAACTATTGTTCAACGGTTTCTATAGCTGTCTTTGTTGCATTTTGTTTAGTTGGTATATGGATTGTAATGTCATCCATTAATCCAATTCAGAATTCAGTTATTCAGGTATCTGATCCCATTAATGAGGGGAAACATATAGTAAGCGAAAATGGTTTCAAACAATTTGAAGATAATATAAGTGATTTACCAGAAGAGTCAACAAGGGGAGATAGCCAGACCCGTAAATCTCATATCGGAAGCCCTCTCGAAAACCAGGATGACCAAAAAGGGAGTGAAAATGTGTTTGATAATACAGCTGAAGAAAACCAGCAAGAAGTTGTTAGGGACAGCGCAGGTTTGGAGAAAGGTCATGGTAATACAACCGAGGAGAAAGAATCAGATAGAAACTTAAATTCAGAATTTGTAGAAACAGAAAACCTAGGTGGTCAAATTGATGATGATAGACTGACTTCGGATGAAGGGAAATCTGACAAGAGTGTAAATGATGACAAATCCGGGACAGAGAAGAGTACAGATGAAGTCACACAACAAGATGAGATGGATGGTTGGACTGAGGAGGAGAGAATCAAGAAAATTTTACCTTCAAAGATAAAACAAAGTACTGGAGAGAATGACACGGAAAGCGATCAAAACAGTCAAGTTTCAAAAGAAATTTCTATTACTGGTAACCAGTCTGAAACTTTGACTGAAGCTAGCAATGAAAGTGGAAATTTGTCATCTAAAGCTGTAGAGGCGTATAATGAGAACGAACCACAGAGGTCTTCGACTTCTATTGACAGCAGCAACTATGACTGGAAACTTTGTAAGACATCCGCAGAATCAGAGTACATTCCTTGCCTTGATAATGTGCAAGCAATTAGAAAGCTTCGAAGTATACGGCACTATGAACATCGAGAGAGGCACTGTCCCGATGAAGCTTCCACTTGTCTTGTTCCTCTACCTGAGGGCTATAGGAGCCCAATCAAGTGGCCCAAAAGCAGGGACATGATATGGTACAACAATGCTCCACACACAAAGCTTGTAGAAGCGAAGGGGCATCAAAATTGGGTCAAAGTTACTGGTGAATACCTTACTTTTCCTGGTGGTGGTACTCAGTTTAAACATGGTGCTCTTCATTACATTGAATTCATTCAGAAATCTCTTCCTACTATTGCATGGGGGAAAAGAAGCCGTGTGATATTGGACGTTGGGTGTGGTGTAGCCAGTTTTGGAGGCTATCTGTTTGAAAAAGACGTTCTCACCATGTCATTTGCTCCTAAAGATGTGCATGAGGCCCAAGTACAATTTGCCCTGGAACGGGGAATTCCTGCCACACTAGGTGTCATGGGCACCAAAAGATTGCCCTTCCCTGGTTCAGTCTTTGATCTACTCCACTGTGCACGCTGTAGAGTCCCTTGGCACGAAGAAGGTGGCAAGCTACTCTTAGAGCTTAATCGTGTCTTGCGACCCGGAGGTTACTTTGTGTGGTCTGCTACTCCAGTGTATCAAAAGGATCCAGAAAATGTTGGGATTTGGAAAGATATGAGTAAAATTACAATGTCAATGTGCTGGGATCTGGTGGTAATTGGAAAGGACAAGTTGAACGGAATTGCAGCAGCAATATATAGAAAACCAACCGACAATGAATGCTATTACAGAAGACTCAAAAATGAGCCGCCAATGTGCAATGAATCTGATGACCCGAATAAAGCCTGGAATATATCACTACAGGATTGTATGCACCAAGTGCCTGAAGGAGCATCAGAGCGTGGATCGGTCTGGCCCGAGCAATGGCCACTGAGGTTGGAGAAATCACCTTATTGGTTAGACTCCCAGTCTGGTTTTTATGGAAGAGCTGCTCCAGTGGAATTCACTGCTGATTACAAGCATTGGAAAAATGTTATTTATCGCTCATATCTTAATGGAATTGGTATGAACTGGTCTACAGTAAGAAATGTAATGGAGATGAGAGCTGTTTATGGAGGGTTTGCTGCTGCACTCAAAAACTTCAAGGTGTGGGTAATGAATGTGGTTCCAATTGATTCTCAAGACACACTGGCATTAATCTATGAGCGTGGATTATTCGGCATTTATCATGATTGGTGTGAATCATTCAGTACCTATCCTAGATCCTATGATCTTCTGCATGCTGACTCTTTGTTTTCAAACCTTAAGGGAAGATGCAACATAGTCGCAGTGATTGCAGAAGTCGATAGGATCTTGAGACCAGAAGGATACTTTATCGTAAGAGACAATGTTGAAACTATAAGTGAGATAGAGAGCATAGCTAAATCTCTAAACTGGGATGTTCGGTTTTCGTATTCGAAATCTGGGGAAGGGTTACTTTGTGTTCAGAAGACATTCTGGCGTCCGACCAAGGTGGAACCGATTTTATCTGCCATTGTTTGA 2433 0.418 MVVGRNFRGEGKKPSNYCSTVSIAVFVAFCLVGIWIVMSSINPIQNSVIQVSDPINEGKHIVSENGFKQFEDNISDLPEESTRGDSQTRKSHIGSPLENQDDQKGSENVFDNTAEENQQEVVRDSAGLEKGHGNTTEEKESDRNLNSEFVETENLGGQIDDDRLTSDEGKSDKSVNDDKSGTEKSTDEVTQQDEMDGWTEEERIKKILPSKIKQSTGENDTESDQNSQVSKEISITGNQSETLTEASNESGNLSSKAVEAYNENEPQRSSTSIDSSNYDWKLCKTSAESEYIPCLDNVQAIRKLRSIRHYEHRERHCPDEASTCLVPLPEGYRSPIKWPKSRDMIWYNNAPHTKLVEAKGHQNWVKVTGEYLTFPGGGTQFKHGALHYIEFIQKSLPTIAWGKRSRVILDVGCGVASFGGYLFEKDVLTMSFAPKDVHEAQVQFALERGIPATLGVMGTKRLPFPGSVFDLLHCARCRVPWHEEGGKLLLELNRVLRPGGYFVWSATPVYQKDPENVGIWKDMSKITMSMCWDLVVIGKDKLNGIAAAIYRKPTDNECYYRRLKNEPPMCNESDDPNKAWNISLQDCMHQVPEGASERGSVWPEQWPLRLEKSPYWLDSQSGFYGRAAPVEFTADYKHWKNVIYRSYLNGIGMNWSTVRNVMEMRAVYGGFAAALKNFKVWVMNVVPIDSQDTLALIYERGLFGIYHDWCESFSTYPRSYDLLHADSLFSNLKGRCNIVAVIAEVDRILRPEGYFIVRDNVETISEIESIAKSLNWDVRFSYSKSGEGLLCVQKTFWRPTKVEPILSAIV 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0508 810 Gene3D Vaccinia Virus protein VP39 379 539 IPR029063 -
Lal17g0508 810 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 3 806 IPR004159 GO:0008168
Lal17g0508 810 MobiDBLite consensus disorder prediction 88 103 - -
Lal17g0508 810 MobiDBLite consensus disorder prediction 156 209 - -
Lal17g0508 810 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 313 568 IPR029063 -
Lal17g0508 810 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 628 778 IPR029063 -
Lal17g0508 810 MobiDBLite consensus disorder prediction 212 254 - -
Lal17g0508 810 PANTHER METHYLTRANSFERASE PMT25-RELATED 3 806 - -
Lal17g0508 810 MobiDBLite consensus disorder prediction 76 254 - -
Lal17g0508 810 CDD AdoMet_MTases 408 503 - -
Lal17g0508 810 MobiDBLite consensus disorder prediction 122 147 - -
Lal17g0508 810 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 290 787 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0508 Lal-Chr17 3515346 3522493 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0508 - - gmx:100793395 1263.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0508 17 3515346 3522493 Lal17g0508 17 3515346 3522493 ECH
Lal17g0508 17 3515346 3522493 Lal4g0636 4 4736767 4741827 LSH