Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0494 ATGGCAATTCCAGTAATTGATTTCTCAAAGCTGAATGGAGAAGAAAGAGCCCAAACTTTGGCACAGATTGCCAAAGGGTGTGAAGAATGGGGATTCTTCCAGTTGATCAACCATGGTATTCCAGAAGAGGTCCTTGAGAGGGTGAAGAAAGTTAGCTCTGAGTGCTATAAGCTGGAAAGAGAGGAAAATTTCAAGAACTCCAAAGCTGTGAAGTTAATAAACGAATTAGCTGAAAAAAAGAGTGGTGAAAAGTTGGAGCATGTGGATTGGGAAGATGTTTTCACTATCATGAATGATAATGAATGGCCAGTAAAAACACCAGGTTTCAGGGAAACCATGACAGAATATAGGACTGGGCTAAAGAATTTGGCAGAGAGGATCATGGAAGTGATGGATGAGAATTTGGGGTTACCAAATGGATACATGAAGAAGGCACTGAATGGTGGAGATGAAGATAATGCATTCTTTGGCACCAAGGTTAGCCACTACCCACCATGTCCCTATCCAGAGCTTGTGAATGGTTTGCGAGCACACACCGACGCAGGAGGTGTGATCCTACTTTTCCAAGATGATAAGGTAGGTGGCCTTCAAATGCTCAAAGATGGAGAATGGATTGATGTGCAGCCATTGCCAAATGCCATTGTGATCAACACTGGTGATCAGATTGAGGTCCTGAGCAATGGTAGATACAAGAGTTGTTGGCACAGGGTTCTGTCCTTTCCTGATGGAAACAGGAGATCAATTGCATCATTCTATAATCCACCACTTAATGCTACAATATATCCTGCACCAAAGTTGGTGGAAAAAGAAAACCAAGAAGTGGATGACACTTATCCTAAGTTTGTTTTTGGTGACTACATGTCTGTCTATGCTGAGCAGAAGTTCCTATCCAAGGAACCAAGGTTTCAAGCTGTTAGGGCTGTGTGA 927 0.4261 MAIPVIDFSKLNGEERAQTLAQIAKGCEEWGFFQLINHGIPEEVLERVKKVSSECYKLEREENFKNSKAVKLINELAEKKSGEKLEHVDWEDVFTIMNDNEWPVKTPGFRETMTEYRTGLKNLAERIMEVMDENLGLPNGYMKKALNGGDEDNAFFGTKVSHYPPCPYPELVNGLRAHTDAGGVILLFQDDKVGGLQMLKDGEWIDVQPLPNAIVINTGDQIEVLSNGRYKSCWHRVLSFPDGNRRSIASFYNPPLNATIYPAPKLVEKENQEVDDTYPKFVFGDYMSVYAEQKFLSKEPRFQAVRAV 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0494 308 Gene3D - 2 308 IPR027443 -
Lal17g0494 308 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 2 306 - -
Lal17g0494 308 Pfam non-haem dioxygenase in morphine synthesis N-terminal 3 100 IPR026992 -
Lal17g0494 308 SUPERFAMILY Clavaminate synthase-like 1 301 - -
Lal17g0494 308 Pfam 2OG-Fe(II) oxygenase superfamily 161 254 IPR044861 -
Lal17g0494 308 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 154 254 IPR005123 -
Lal17g0494 308 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE 5-LIKE 2 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0494 Lal-Chr17 3428286 3430054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0494 1 271 Glycosyltransferase AT5G59530 33.099 1.16e-42 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0494 K05933 - gmx:100796909 545.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0494 17 3428286 3430054 Lal17g0494 17 3428286 3430054 ECH