Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0490 ATGGTTGAGAAGGTTGGTGCTAACAACAACAACATCACCCATCATCAAACATTTGATGTTTCTGTTGATGTCCATAAACAAGGAGCCTCCAAGTGCTTTGATGATGATGGCCACCTCAAAAGAACCGGAACTGTGTGGACAGCAAGTTCTCACATAATAACTGCTGTGATTGGTTCTGGAGTTCTATCTCTTGCTTGGGCTATAGCTCAACTTGGATGGATTGCTGGTCCTGCTGTTATGATTCTCTTCTCTTTGGTAACATACTACACCTCCACTCTTCTAGCTGATTGTTACAGAACTGGTGACCCTGTTTCTGGAAAGAGAAACTACACTTACATGGATGTTGTTCATTCAAATCTTGGTGGTTTTAAGGTCAAGCTTTGTGGGCTAGTTCAATATGTTAACCTTTTTGGAGTTGCCATTGGATACACTATAGCATCTTCCATAAGCATGATGGCAATCAAAAGGTCTAATTGTTTCTACAAGAGTGGAGGGAAAAACCCATGCAAAATGAACAGCAACATTTACATGATTTCCTTTGGTATAGCGGAAATTATTCTGTCTCAAATTCCAGATTTTGATCAATTATGGTGGCTCTCTCTTGTAGCTGCTGTAATGTCCTTCACTTATTCAACTATTGGCCTTGGACTTGGTATTGGTAAAGTTATAGAAAACAAAGGAGTTAAGGGAAGCCTAACAGGAATCACTGTTGGTTCTGTGACAGAGACTGAAAAAGTTTGGAGGAGCTTCCAAGCTCTTGGTGACATAGCCTTTGCCTACTCATACTCAATGATCCTTATAGAAATTCAGGACACAGTGAAATCCCCTCCATCAGAGTCAAAAACAATGAAGAAAGCTACTCTTATTAGTGTTATTGTCACCACACTTTTCTACATGCTATGTGGGTGCTTTGGTTATGCTGCTTTTGGAGATGCAAGTCCAGGAAACCTTCTAACTGGTTTTGGATTCTACAACCCATACTGGCTCCTTGACATAGCCAATGCTGCAATAGTTATCCACCTTCTTGGTGGATACCAAGTTTACTGCCAACCCCTCTTTGCTTTCATTGAGAAAAATGCATCAAAAAGATTCCCACACAGTGATTTCATAAACAAAGCCATTGAAGTTACAATCCCAGGTTTCAAGCACCCTTATAAACTCAACCTCTTCAGGTCAGTTTGGAGAACAATGTTTGTGATCACAACAACTGTGATATCAATGCTGTTACCATTCTTCAATGACATTGTTGGACTTCTTGGTGCACTTGCATTTTGGCCTCTTACAGTGTATTTCCCAGTGGAAATGTACATTACTCAAAAGAAAATACCAAAGTGGAGCACCAAATGGATTTGTCTTCACATGCTTAACATTGCATGTCTTATCATAAGTATAGCAGCTGCAGCAGGTTCTATTGCTGGGGTTGTCAGTGATCTTAAGTCTTATAAGCCATTCAAGAGTGAGTACTGA 1467 0.4015 MVEKVGANNNNITHHQTFDVSVDVHKQGASKCFDDDGHLKRTGTVWTASSHIITAVIGSGVLSLAWAIAQLGWIAGPAVMILFSLVTYYTSTLLADCYRTGDPVSGKRNYTYMDVVHSNLGGFKVKLCGLVQYVNLFGVAIGYTIASSISMMAIKRSNCFYKSGGKNPCKMNSNIYMISFGIAEIILSQIPDFDQLWWLSLVAAVMSFTYSTIGLGLGIGKVIENKGVKGSLTGITVGSVTETEKVWRSFQALGDIAFAYSYSMILIEIQDTVKSPPSESKTMKKATLISVIVTTLFYMLCGCFGYAAFGDASPGNLLTGFGFYNPYWLLDIANAAIVIHLLGGYQVYCQPLFAFIEKNASKRFPHSDFINKAIEVTIPGFKHPYKLNLFRSVWRTMFVITTTVISMLLPFFNDIVGLLGALAFWPLTVYFPVEMYITQKKIPKWSTKWICLHMLNIACLIISIAAAAGSIAGVVSDLKSYKPFKSEY 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0490 488 Pfam Transmembrane amino acid transporter protein 41 475 IPR013057 -
Lal17g0490 488 PANTHER AMINO ACID CARRIER 12 482 - -
Lal17g0490 488 PANTHER OS05G0424000 PROTEIN-RELATED 12 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0490 Lal-Chr17 3392914 3395815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0490 1 488 Organic Solute Cotransporters AT5G09220 74.442 0.0 776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0490 K24917 - jre:109009851 806.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0490 17 3392914 3395815 Lal17g0490 17 3392914 3395815 ECH
Lal17g0490 17 3392914 3395815 Lal4g0430 4 2994380 2997404 LSH