Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0480 ATGGCATCAGATTTTGCGTTAACAGTTCCTTCTGAACTCGAATCAGTTTTGAGGGTGAAGACTGTTGAGTTCTTCATTACAAGGAGGCCATGGCTTGATCTTTATGGAGTTAATGTGAGACCCGTTGCACCGTTTGGAAGTGCAAGTAGAAAGCCTTACGTGGATTCTGCGCTTATACATCGTTCCTTACCGGATGAACTGCTTTTTGAGGTCATTGCTCGAATGACTCCATTTGACATGGGAAGAGCATCTTGTGTATGCCGAAAATGGAGGTACACAATTAGAAACCCTGTATTCTGGCGCAATGCATGCTTGAAGGCTTGGCAGTTCTATGGAGTGGTAGAAAACTATAAGATCCTTCAATCAAAATATGATGGCTCATGGCGGAAAATGTGGCTTTCACGACCAAGGTTGCGAACTGATGGTCTTTATGTGAGCAGAAACACCTACATTCGAGTGGGCATTGCTGAGTGGAAGATTACTAATCCAGTTCATGTGGTATGCTATTTCCGGTACTTGAGATTTTTCCCTTCTGGGCGATTTCTTTACAAGAACTCTTCTCAAAAGGTCAAGGATGTGGTGAAGTGCATGAACTTTCGATCATCTAAAGCAGAATCTGTTTTTGGTGGCAACTACACATTGTCAGATGACAAGGTTGAAGCTGCTGTACTGTATCCAGGTGCGCGACCTACTGTATTGAGGATGCGCTTGAGGCTTAGAGGAACAATTGCAGGAGCAAACAATAGGATGGATTTGGTCTCACTTGTCACTAGTGGTGTAAACAGTAGTGAGGCAAGTGCACCTGAAGAGGACATTCTTGGTGTTGTCGAAGGGTGGCATGATGATGAAACTCACAACCCAGATGTTCCAGCAGTCTCACATAAGAGGGGCATGACTCCCTTTGTCTTTGTTCCATTTGGGGAGGTGGAGACATCTGTTTTGAACCTTCCTATAGATAAAATGGATTATTTTGTACCTGGTTGA 984 0.439 MASDFALTVPSELESVLRVKTVEFFITRRPWLDLYGVNVRPVAPFGSASRKPYVDSALIHRSLPDELLFEVIARMTPFDMGRASCVCRKWRYTIRNPVFWRNACLKAWQFYGVVENYKILQSKYDGSWRKMWLSRPRLRTDGLYVSRNTYIRVGIAEWKITNPVHVVCYFRYLRFFPSGRFLYKNSSQKVKDVVKCMNFRSSKAESVFGGNYTLSDDKVEAAVLYPGARPTVLRMRLRLRGTIAGANNRMDLVSLVTSGVNSSEASAPEEDILGVVEGWHDDETHNPDVPAVSHKRGMTPFVFVPFGEVETSVLNLPIDKMDYFVPG 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0480 327 Pfam F-box only protein C-terminal region 117 327 IPR045464 -
Lal17g0480 327 Pfam F-box domain 62 101 IPR001810 GO:0005515
Lal17g0480 327 PANTHER F-BOX ONLY PROTEIN 9 12 311 - -
Lal17g0480 327 Gene3D - 47 141 - -
Lal17g0480 327 ProSiteProfiles F-box domain profile. 57 103 IPR001810 GO:0005515
Lal17g0480 327 SMART fbox_2 63 103 IPR001810 GO:0005515
Lal17g0480 327 SUPERFAMILY F-box domain 62 137 IPR036047 GO:0005515
Lal17g0480 327 PANTHER F-BOX ONLY PROTEIN 48-RELATED 12 311 IPR045118 GO:0019005|GO:0031146
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0480 Lal-Chr17 3306044 3312862 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0480 K10295 - gmx:100786704 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0480 17 3306044 3312862 Lal4g0423 4 2941022 2953338 LSH