Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0478 ATGGCTTCAACGATTCCTAATGCATCCTTTACTGTAAAAAAGTCTTCTTTTTTAGATGGGAATGGCTATGTTGGTGTTTCACCATTGCCCACAAATTTAAAGTTTATTTATTCATCAAATTCTCGCCCAAGTCTACACCTTTTTGCAGTTAGAGCCACCAAGTCTCAAAATGGCTCTGACTCTCTTCACAAGTTAGGCCTCACTGATGCTCAATCTGAAGCCGCCGTTGTCGCCGGAAATGTGCCTCACGCGCCTCCTGTTCCGCCCACACCGGCTGCCCCTATTGGAACCCCGGTGGTTCCTTCACTTCTACTTCCCAGGCGTCCTCGCCGTAATCGGAGGTCACCGGTACTTCGAGAAGCGTTTCAAGAAACAAGTTTGTCACCTGCAAATTTTGTGTATCCACTTTTCATTCATGAAGGTGAGGAGGACACACCAATTGGGGCTATGCCTGGATGCTATAGGCTTGGATGGAGACATGGACTCGTGGAAGAGGTTGCGAAGGCACGAGATGTTGGTGTCAATAGTGTTGTACTCTTCCCCAAAGTCCCTGATGCTTTGAAGTCTGCCACAGGAGATGAAGCATACAATGAGAATGGTTTAGTTCCTCGGACAATACGTTTGCTCAAGGATAAGTACCCTGACCTTGTTATCTATACAGATGTTGCGTTAGATCCTTATTCGTCAGATGGGCATGATGGTATAGTTAGAGAGGATGGAGTTATTATGAATGATGAGACAGTTCATCAGTTATGTAAACAAGCTGTAGCCCAGGCCCGAGCTGGAGCTGATGTTGTTAGTCCTAGTGATATGATGGATGGTAGAGTGGGAGCAATACGAGCAGCTCTTGATGCTGAAGGCTTTCAGCATGTTTCTATAATGTCTTATACAGCAAAGTATGCAAGCTCATTTTATGGTCCATTTAGAGAAGCACTGGAGTCAAACCCCCGTTTCGGAGACAAGAAGACAGAGGCATTGACTGAGTTGCGGGAAGATGAATCTGAAGGAGCTGATATTCTCTTGGTAAAGCCCGGTCTTCCATATTTGGATATCATACGACTACTCAGGGATAATTCTCCTTTGCCAATTGCAGCATATCAGGTTTCTGGTGAATACTCGATGATAAAAGCAGCTGGTGCTCTTAAAATGATTGACGAAGAAAAGGTTATGATGGAGTCACTATTGTGCCTCCGAAGGGCTGGTGCTGACATCATCCTTACATATTTTGCTCTACAAGCAGCAAGATCTTTGTCTGGAGAGAAGAGGTAA 1269 0.4507 MASTIPNASFTVKKSSFLDGNGYVGVSPLPTNLKFIYSSNSRPSLHLFAVRATKSQNGSDSLHKLGLTDAQSEAAVVAGNVPHAPPVPPTPAAPIGTPVVPSLLLPRRPRRNRRSPVLREAFQETSLSPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVEEVAKARDVGVNSVVLFPKVPDALKSATGDEAYNENGLVPRTIRLLKDKYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVAQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALESNPRFGDKKTEALTELREDESEGADILLVKPGLPYLDIIRLLRDNSPLPIAAYQVSGEYSMIKAAGALKMIDEEKVMMESLLCLRRAGADIILTYFALQAARSLSGEKR 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0478 422 Gene3D Aldolase class I 99 422 IPR013785 -
Lal17g0478 422 PANTHER DELTA-AMINOLEVULINIC ACID DEHYDRATASE 2, CHLOROPLASTIC-RELATED 84 421 - -
Lal17g0478 422 CDD ALAD_PBGS_aspartate_rich 118 418 - -
Lal17g0478 422 Pfam Delta-aminolevulinic acid dehydratase 107 415 IPR001731 GO:0004655|GO:0033014|GO:0046872
Lal17g0478 422 SUPERFAMILY Aldolase 103 418 - -
Lal17g0478 422 SMART ALAD_2 104 417 IPR001731 GO:0004655|GO:0033014|GO:0046872
Lal17g0478 422 ProSitePatterns Delta-aminolevulinic acid dehydratase active site. 336 348 IPR030656 -
Lal17g0478 422 PANTHER DELTA-AMINOLEVULINIC ACID DEHYDRATASE 84 421 IPR001731 GO:0004655|GO:0033014|GO:0046872
Lal17g0478 422 PRINTS Delta-aminolevulinic acid dehydratase signature 224 238 IPR001731 GO:0004655|GO:0033014|GO:0046872
Lal17g0478 422 PRINTS Delta-aminolevulinic acid dehydratase signature 255 274 IPR001731 GO:0004655|GO:0033014|GO:0046872
Lal17g0478 422 PRINTS Delta-aminolevulinic acid dehydratase signature 293 312 IPR001731 GO:0004655|GO:0033014|GO:0046872
Lal17g0478 422 PRINTS Delta-aminolevulinic acid dehydratase signature 391 410 IPR001731 GO:0004655|GO:0033014|GO:0046872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0478 K01698 - pvy:116131601 618.616