Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0474 ATGGTGGATCTTAACCGCGTTTTTGGCACAAACCCAATTCGTTCAATTTGCATTGCATGCAAAACAATTATCAGAAGATGGTTTAGACGTAGGAAATCATTATCCTCAAAGGAAGATCATAAAAGAAAACGTCACAGCCAAACTCAACAGGAACCTGTTGAAGATAAAAAAGCGGGTGAAACCATGAATGGAGTTCATAGCTTCAGATTCAATGACGACCCATTAAGAGGAAATAATCCAACAAGTTCAAGAAGAGAAGGAGTATATAGGCATAGAAAATTAGATAGTTCATGTTTCCCTTGCATGATGGATCATATGTCTAGAAATGAATACAGAAAGAATCAAACCCCACCAAACAAGAGCAGGGTGAGCTATGATTCTATCCCTTCCCCTTCTTCTTCTTCATGGAATAACAGTGGCAATTTGAAGCATCCTAATCTGCAATCAAAAACCTCAAGCCGTAGGAGCAATCCAATCATGTATTCCAATTCATCTGGAATGCTAAAACCCCCACCAATTGAGAAAAAGATTGAATGCACCCTTGAAGAATTGTGCTATGGATGCCAGAAAAAGATTAAAATCACTAGGGATGTCCTTACAAATACCGGGGGAGTAACTCAAGAGGAGGAATTGCTAACAATAAATGTACAGCCTGGATGGAAGAAAGGGACAAAGATTACATTTGAAGGTAAAGGGAATGAAAGACCAGGTGCATACAGAGAAGATATAATATTTTTCATCTCAGAAAAGAGACACCAATTGTTTAGAAGAGAAAAGGATGATTTGGAATTGGGTATTGAAATTCCCTTGGTAAAGGCACTAACAGGTTGTACAATATCAGTTCCACTATTGGGTGGAGATAAGATGAATTTGACAGTAGATGAAATCATATACCCTGGCTATGAGAAGATCATCACTGGCCAAGGTATGCCAATTCCGAAAGAATCAGGGTTGAGAGGGAACCTCAAAATTACATTTCTAGTTGAGTTTCCAACGCAACTCACACGTAATCAACGATCCGAGACTACATTTCTCAATCTTTGGAACATCATTAGTTCTGAAATCCAAAGTAATGCTTTTGTAGTTGAAGGAAGTATTATTGGTCATTGTGTCGTTTGTCATATAAGAAGGCATGACACAGCGCTACTAAAAGACTAA 1158 0.3826 MVDLNRVFGTNPIRSICIACKTIIRRWFRRRKSLSSKEDHKRKRHSQTQQEPVEDKKAGETMNGVHSFRFNDDPLRGNNPTSSRREGVYRHRKLDSSCFPCMMDHMSRNEYRKNQTPPNKSRVSYDSIPSPSSSSWNNSGNLKHPNLQSKTSSRRSNPIMYSNSSGMLKPPPIEKKIECTLEELCYGCQKKIKITRDVLTNTGGVTQEEELLTINVQPGWKKGTKITFEGKGNERPGAYREDIIFFISEKRHQLFRREKDDLELGIEIPLVKALTGCTISVPLLGGDKMNLTVDEIIYPGYEKIITGQGMPIPKESGLRGNLKITFLVEFPTQLTRNQRSETTFLNLWNIISSEIQSNAFVVEGSIIGHCVVCHIRRHDTALLKD 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0474 385 Gene3D - 169 251 - -
Lal17g0474 385 MobiDBLite consensus disorder prediction 33 89 - -
Lal17g0474 385 MobiDBLite consensus disorder prediction 40 62 - -
Lal17g0474 385 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 13 343 - -
Lal17g0474 385 MobiDBLite consensus disorder prediction 110 168 - -
Lal17g0474 385 Gene3D - 252 332 - -
Lal17g0474 385 SUPERFAMILY HSP40/DnaJ peptide-binding domain 172 252 IPR008971 GO:0006457|GO:0051082
Lal17g0474 385 Pfam DnaJ C terminal domain 173 331 IPR002939 -
Lal17g0474 385 CDD DnaJ_C 171 334 - -
Lal17g0474 385 MobiDBLite consensus disorder prediction 112 164 - -
Lal17g0474 385 SUPERFAMILY HSP40/DnaJ peptide-binding domain 255 340 IPR008971 GO:0006457|GO:0051082
Lal17g0474 385 PANTHER FAMILY B PROTEIN, PUTATIVE-RELATED 13 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0474 Lal-Chr17 3259584 3261845 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0474 K09519 - gmx:100782604 408.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0474 17 3259584 3261845 Lal4g0417 4 2894569 2895798 LSH