Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0461 ATGATTTCATTCTTCCTTCAATGCCCAGCACACAGAATTGGGTCTAAAACGTGTGAAACAATGGTGTTGTTGACAGACCTTCAGATTGAATTTTCCAAATATGAGCACCCAGTTGTTTTGACCGTTGAGGCTCAGGCAAAATATGTTGGACACTTGGGGGGTGGGCTGAGCAAAAATTTATTTTTGAAGGATAAGAAAAACAGGTTTTATATTGTTTCTGCTTTAGCTGATACTAAAGTAGATCTCAAAGTATTATCTCAACGGCTTGGTTTGGGAAAAGGAGGTCTGAGAATGGCACCTGAAGAGGCTTTAGGTGAAATACTTCAGGTGCCATTGGGTTCTGTCACTCCATTTGCGCTAGTGAATGAATCAGCACGGGATGTTTCACTGTTATTGGATCAAGGATTCAAAACACTTGAGCACTGCTTCTTCCATCCATTGTCGAATGACATGACCATATCTCTAAATGCACGTGATCTCGACAAATTCTTTAAAGCAATAGGAAGGAACCCCTCATATGTTGATTTAGAGGCCAATCCTAAGGTGGGGAAAGATGAACCCCCTGATCTAGCTTCACTAGTTCCATCCGGTTCAATAGTTTTGCCTGATCAGCCAGAAAAGCAGCCTTCACAAGTTCCTAAGGACGGAAACCATGTTTCTGGGGATAATAAGTCCAAAGCGGTTTCAGCCAAAGTTGTCAAGCCATCTGGTAGTGAGAAAAATACAAAGGGGACACCAGTAAAAAATGTTCATTCACCAACCCCAGTTGCAGACGCTGAGCAATTCGTTCAAGAGATATTGCGTAAAACATCAGAATTATTGCTTTCACAGATCAAGGAAGAAACCATAAAGCAACATGGAGATCAGCTGGGTACTGTGGTGTCTGATAATCTAAAGAAAAGCCTCGGCTCGGATTTTAAGAACCTTTGTACGATGTTTAAGAACACTGCATACACAGAAGGGTTCCATGCTGGTACTCAATGTCATCCCAGGCACTAG 999 0.4204 MISFFLQCPAHRIGSKTCETMVLLTDLQIEFSKYEHPVVLTVEAQAKYVGHLGGGLSKNLFLKDKKNRFYIVSALADTKVDLKVLSQRLGLGKGGLRMAPEEALGEILQVPLGSVTPFALVNESARDVSLLLDQGFKTLEHCFFHPLSNDMTISLNARDLDKFFKAIGRNPSYVDLEANPKVGKDEPPDLASLVPSGSIVLPDQPEKQPSQVPKDGNHVSGDNKSKAVSAKVVKPSGSEKNTKGTPVKNVHSPTPVADAEQFVQEILRKTSELLLSQIKEETIKQHGDQLGTVVSDNLKKSLGSDFKNLCTMFKNTAYTEGFHAGTQCHPRH 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0461 332 SUPERFAMILY YbaK/ProRS associated domain 23 176 IPR036754 GO:0002161
Lal17g0461 332 MobiDBLite consensus disorder prediction 210 224 - -
Lal17g0461 332 Gene3D - 11 183 IPR036754 GO:0002161
Lal17g0461 332 MobiDBLite consensus disorder prediction 178 256 - -
Lal17g0461 332 Pfam Aminoacyl-tRNA editing domain 36 163 IPR007214 GO:0002161
Lal17g0461 332 CDD PrdX_deacylase 23 174 - -
Lal17g0461 332 PANTHER YBAK DOMAIN-CONTAINING PROTEIN 23 330 IPR040285 -
Lal17g0461 332 MobiDBLite consensus disorder prediction 235 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0461 Lal-Chr17 3168811 3174861 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0461 - - ahf:112764287 487.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0461 17 3168811 3174861 Lal17g0461 17 3168811 3174861 ECH