Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0458 ATGGCTTCTGAGAAGGTTGAGACTGTTGTTGCAGGGAATTACTTAGAAATGGAAAGGGAAGAGGAAGATTTTAAGTCTACTTCTAGCAAATTTTCTAGACTCTTATGGCATGGTGGCTCTGTCTATGATGCATGGTTTAGCTGTGCTTCTAATCAGGTTGCTCAAGTGCTATTGACATTACCATATTCATTTTCACAACTTGGGTTGGTATCTGGGATTGTATTTCAGCTTTTTTATGGACTTATGGGAAGCTGGACTGCTTACCTTATCACTGCCCTTTATGTTGAGTACAGAACCAGAAAGGAAAGAGAAAAAGTTGATTTCAGGAACCATGTAATTCAGTGGTTTGAAGTTCTTGATGGACTTCTAGGCAAAAACTGGAGGAATCTTGGTCTCTTTTTCAATTGTACTTTCCTTCTATTTGGATCAGTAATTCAACTAGTTGCCTGTGCAAGTAACATATACTACATAAATGACAATTTGGACAAGAGAACTTGGACTTACATCTTTGGTGCCTGCTGTGCAACAACAGTGTTCATTCCTTCTTTTCACAATTATAGAATCTGGTCATTTTTGGGCCTCATTATGACCACTTACACTGCATGGTATATGACAATAGCTTCCCTTATTCATGGACAGGTTGAGGGTGTGACACACTCAGGGCCAACCAAATTGGTTCTCTACTTCACTGGGGCTACCAACATTCTCTACACATTTGGTGGACATGCTGTTACAGTGGAAATTATGCATGCAATGTGGAAGCCACAGAAGTTTAAGATGATATATCTGATAGCAACATTATATGTCCTGACCCTAACTTTACCATCAGCATCTGCAGTTTATTGGGCATTTGGTGACATGCTCCTAACCCATTCCAATGCCCTATCTTTGCTCCCAAGGACAGGGTTCAGAGATATTGCTGTCATTCTTATGCTCATTCACCAGTTCATAACTTTTGGATTTGCTTGCACTCCTCTATATTTTGTGTGGGAGAAATTTATTGGGGTGCATGAAACCAAGAGTTTGTTCAAGAGGGCATTGGTTAGAGTTCCTGTGGTGATTCCAATATGGTTCTTAGCAATCATATTCCCTTTCTTTGGTCCCATTAACTCAACTGTTGGATCTCTCTTGGTCAGCTTCACTGTTTACATAATTCCTGCCTTGGCACACATGGTCACATTTGCTTCAGCAACTGCTAGAGAGAATGCTATAGAGAGACCACCATCAATTTTAGGAGGTTGGGTAGGATCATACTCAATGAATGTTTTTGTGGTGGTATGGGTTTTGGTGGTGGGATTTGGGTTAGGAGGATGGGCAAGTATGCTTAATTTCATACACCAAATTGACACATTTGGACTATTTGCTAAGTGCTATCAGTGTCCCCCTCACAAGACTTAA 1398 0.4049 MASEKVETVVAGNYLEMEREEEDFKSTSSKFSRLLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGLVSGIVFQLFYGLMGSWTAYLITALYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKNWRNLGLFFNCTFLLFGSVIQLVACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLIMTTYTAWYMTIASLIHGQVEGVTHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKMIYLIATLYVLTLTLPSASAVYWAFGDMLLTHSNALSLLPRTGFRDIAVILMLIHQFITFGFACTPLYFVWEKFIGVHETKSLFKRALVRVPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHMVTFASATARENAIERPPSILGGWVGSYSMNVFVVVWVLVVGFGLGGWASMLNFIHQIDTFGLFAKCYQCPPHKT 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0458 465 PANTHER AUXIN TRANSPORTER-LIKE PROTEIN 3 3 460 - -
Lal17g0458 465 PANTHER OS05G0424000 PROTEIN-RELATED 3 460 - -
Lal17g0458 465 Pfam Transmembrane amino acid transporter protein 37 428 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0458 Lal-Chr17 3140107 3143254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0458 1 464 Organic Solute Cotransporters AT1G77690 85.501 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0458 K13946 - gmx:100815243 894.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0458 17 3140107 3143254 Lal17g0458 17 3140107 3143254 ECH
Lal17g0458 17 3140107 3143254 Lal21g0511 21 3670793 3674133 LSH