Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0440 ATGGATTCAACAAATGGATCCCAAACTCTTGAAGAACAAGCCAGAGCATTTTTTGACTCTGCTCCTCCTTTGCAAAACACTCATCAAATAACTCAAAAATTGGACCAATTTATTCAACACAGGTCTTCACCATCAGCAAATGGAGAAAATCGGAGAATTGTTTGTGTGACATCTGGTGGTACCACTGCTCCATTGGAGCAACGGTGTGTCCGCTATGTTGACAACTTCAGTTCAGGTCATAGAGGAGCCACATCCACAGAGTATTTTCTGAAGGCTGGATATGCTGTTATCTTTCTGTACCGTAGGGGAAGTTTCCAGCCATTTTGCAGATCCCTTCCTGATGATCCCTTAGTTGAATGCTTCGTGCCCACTGATGACTTAAACATTCGAGTTCGTGAAGCTTATTCTGAAGCTGTGAAGAGGGCTGTCGTGGATCATCATGCTGCAGTGACAGGAGGGCTCTTGTTAAAACTTCCTTTCAACACCATATTTGAGTATCTTCAGATGTTGCAACTGATTGCTACCTCAATGAGATGTCTTGGCCCGTGCGCGATGTTCTATCTCGCTGCTGCTGTATCTGACTTTTATGTTCCTTGGAAGGACATGGTAGAACACAAAATTCAGTCAGGATCTCATTTTTTGGACGTGCAACTAGTTCAAGTGCCTAAGATGCTTTCAATGCTTAGAAAAGATTGGGCTCCCCTGGCTTTCTGCGTATCATTCAAGTTAGAGACAGATTCAAACATTCTTCTAAATAAGGCTGCCGCCGCTCTTGAGAAGTACAAGATGCATGCAGTTGTGGCAAATGAACTCACAACTCGCAAGGAGCACGTTGTGGTTGTCACTAGTGCTGACAACATTATTGTTCATCGCGATAAGAGTCACTCTGGTAACGATGTGGAGAATCCCCTGATCAAACTTCTTTCCGAGAGACATGAAGCTTACATTAAGGATTCTAGTAGACTCGTCTAG 972 0.4362 MDSTNGSQTLEEQARAFFDSAPPLQNTHQITQKLDQFIQHRSSPSANGENRRIVCVTSGGTTAPLEQRCVRYVDNFSSGHRGATSTEYFLKAGYAVIFLYRRGSFQPFCRSLPDDPLVECFVPTDDLNIRVREAYSEAVKRAVVDHHAAVTGGLLLKLPFNTIFEYLQMLQLIATSMRCLGPCAMFYLAAAVSDFYVPWKDMVEHKIQSGSHFLDVQLVQVPKMLSMLRKDWAPLAFCVSFKLETDSNILLNKAAAALEKYKMHAVVANELTTRKEHVVVVTSADNIIVHRDKSHSGNDVENPLIKLLSERHEAYIKDSSRLV 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0440 323 Pfam DNA / pantothenate metabolism flavoprotein 165 276 IPR007085 -
Lal17g0440 323 SUPERFAMILY CoaB-like 49 316 IPR035929 -
Lal17g0440 323 PANTHER PHOSPHOPANTOTHENATE-CYSTEINE LIGASE-LIKE PROTEIN 5 321 - -
Lal17g0440 323 Gene3D - 30 320 IPR035929 -
Lal17g0440 323 PANTHER CORNICHON-RELATED 5 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0440 Lal-Chr17 2999332 3003380 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0440 K01922 - gmx:100808811 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0440 17 2999332 3003380 Lal17g0440 17 2999332 3003380 ECH
Lal17g0440 17 2999332 3003380 Lal4g0384 4 2636741 2641429 LSH