Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0428 ATGGCTTCTTCAAGAATAGCTTTGGTGTTGTTTATGTGTGTCCTTCCGGCGATGATTGCCGCCATCCGCCCTGAGAAGAACCCTTTCTCCGTCAAGGGTCGTGTCTTCTGTGACCCTTGCCGTGCTACTTTTGAAACCTCAGCCACCACTTACATTGCTGGTGCGGAGGTTATATTGGAATGCAGTGACAGAGCAACCAATGAAGTTGTGTACACCAAAAAGGGTATTACTGACTCAACAGGAACATATATAATCACAGTGAATGAGGATCACAAAGACCAGGTTTGTAATGCCAAGCTTGTGAACAGTAACCACCCAACTTGTAATGAAGTCACCCCGGGCCGCGACCAAGCACGAGTTATTCTTACCGGCTACAATGGCATTGCTTCCAATGATAGGTTTGCTAATGCTATGGGTTACATGACTCAGGATGTTGCATCTGGTTGTGCTGATGTTCTCAAGCAATACCAGGAGTTTGATAAAGAGGATTAG 492 0.4593 MASSRIALVLFMCVLPAMIAAIRPEKNPFSVKGRVFCDPCRATFETSATTYIAGAEVILECSDRATNEVVYTKKGITDSTGTYIITVNEDHKDQVCNAKLVNSNHPTCNEVTPGRDQARVILTGYNGIASNDRFANAMGYMTQDVASGCADVLKQYQEFDKED 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0428 163 PANTHER ALLERGEN-LIKE PROTEIN BRSN20 5 162 - -
Lal17g0428 163 PANTHER PROTEIN DOWNSTREAM OF FLC-RELATED 5 162 IPR006041 -
Lal17g0428 163 Pfam Pollen protein Ole e 1 like 31 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0428 Lal-Chr17 2882059 2884888 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0428 - - gmx:100305566 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0428 17 2882059 2884888 Lal17g0428 17 2882059 2884888 ECH
Lal17g0428 17 2882059 2884888 Lal21g0494 21 3508792 3511000 LSH