Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0427 ATGGCCCTCTCACCTTCCTTTGTCTCCTTCTTTTTCCTCACTCTCACTCTCACTCTCACTTCTCAACTACCACCACCACCACCACCATTTGCTTGTGATTGGTCCAACCCTTCCTCGATATCCTATCCATTCTGTAACCCCAAGCTCTCCATACTTGAAAGAACAACAGACCTTGTCTCCAGGCTCACTTTGGATGAGAAACTCTCTCAACTCGTTAACTCTGCTCCTCCGATTCCAAGAATCGGTATTCCAGGTTATGAGTGGTGGAGTGAAGCACTCCATGGCGTTGCAAGGAGTCGTGGCATTAATTTCAATGGTGCTATATCTTCTGCAACTAGCTTCCCTCAAGTTATTCTCACTGCTTCTACCTTTGATTCTCACCTCTGGTACCGTATAGGTTTGGCGATTGGAATTGAAGGGAGAGCAATATATAATAATGGTCAAGCTATGGGGATGACATTTTGGGCTCCAAACATTAACATATTCAGAGACCCGAGATGGGGTAGAGGACAAGAAACAGCTGGTGAAGATCCATTAGTAACTTCAACATATGCAGTGTCCTTTGTGAGAGGACTTCAAGGTGATTCCTTTCATGGAACCAAGTTGATGGGTCATCTTCTAGCTTCAGCTTGTTGCAAGCATTTTACTGCTTATGATTTGGATAATTGGAAAGGTGTTAGTCGCTTTGTCTTTGATGCTCGTGTTAGTTTGCAAGACTTAGCAGACACTTATCAGCCACCTTTTAAGAGTTGTGTGAAGCAAGGAAGAGCTAGTGGGATAATGTGTGCTTATAATCGGGTCAATGGGGTCCCAAGCTGTGCAGATTTCAATCTCTTAACCAAAACTGCCAGAGAAAAATGGGATTTCAATGGGTACATTACTTCAGATTGTAATGCAGTGGCAATCATACATGACCAGCAAGGATATGCAAAATCACCAGAGGATGCTGTAGCCGATGTTCTTCGGGCTGGGATGGATTTGGAATGTGGTAGTTATTTGTCAGACCATGCTAAATCAGCTGTATTGCAGAAAAAAGTACCTATATCTGAAATAGACCGTGCCCTTCATAATCTGTTTTCTATTAGAATAAGGCTAGGCCTATTTAATGGAAATCCAACCAAACTCTCATTTGGCATGATTGGCCCCAATAATGTTTGTTCCAAAAAGCACCAATATCTTGCACTTGAAGCTGCAAGAAGTGGCATTGTCCTTTTGAAGAACTCTGATGCACTTCTCCCACTTCCAAAAACAAACCCTGCTCTGTCCCTGGCAGTGATAGGTCCCAACGCCAATGATTTCTTAACTCTTGCAGGAAACTATGCTGGCCCTCCTTGTAGAAATATGACAGTATTGCAAGGTTTACATCACTATGTTAAGAACACTGTTTTTCATCCTGGCTGTGATGGTGGACCAAAGTGTCCTACTGCTCAAATAGAAGAGGCAGTGGAAGTTGCAAGGAAAGTGGATTATGTGGTGCTGGTTATGGGGTTGAATCAAAGTGAGGAGATGGAAGACCTGGATCGCGTTCAACTTGACTTGCCAGGCAAGCAACTAGAACTTATCAATTCAGTTGCTAAAGCTTCTAAAAGACCAGTTATTTTGGTGCTCCTTTGTGGAGGTCCTGTAGATATCACTTCACCCAAGTATAATCACAAAATTGGAGGCATCCTTTGGGCTGGTTATCCAGGGGAACTTGGAGGCATAGCACTTGCACAGATTATCTTTGGTGACCATAACCCAGGAGGAAGACTACCAGTTACTTGGTATCCAAAAGATTACATCAAAGTACCAATGACAGACATGAGGATGAGAGCTGATCCATCATCAGGGTATCCAGGGAGAACTTACAGATTTTACAAAGGTCCAAGGGTGTATAAATTTGGCTATGGCTTAAGCTACTCAAAATATTCCTATGAGTTTGTTTCTGTGATACATGAAAAGCTTCACTTCAATCAATCATCCACTCATTTGATGATGGATGAAAATTCAGAAACCATAAGGTACAAATTAGTTTCTGAGTTGGGTGAAGAAACTTGCCAAAGCAAGATGGTCTCAGTGACTGTGGGAGTTAAAAATCATGGGAGCATGGTGGGGAGGCATCCTGTGTTGCTATTCATGAAGCCTGGAAAACACAGAAGTGGAAGTCCTATGAAACAGTTGGTGGGTTTTGAGAGTGTGTTGCTTGATGCAGGAGAAATGACTCATATTGAATTTGAGCTAAGCCCTTGTGAGCACCTTAGTAGAGCAAATGAGGCTGGTTTAATGGTAATAGAAGAAGGGTCTCATATGTTGCTTGTGGGTGATGCAGAGTACCCAATACATATCATTATATGA 2334 0.4259 MALSPSFVSFFFLTLTLTLTSQLPPPPPPFACDWSNPSSISYPFCNPKLSILERTTDLVSRLTLDEKLSQLVNSAPPIPRIGIPGYEWWSEALHGVARSRGINFNGAISSATSFPQVILTASTFDSHLWYRIGLAIGIEGRAIYNNGQAMGMTFWAPNINIFRDPRWGRGQETAGEDPLVTSTYAVSFVRGLQGDSFHGTKLMGHLLASACCKHFTAYDLDNWKGVSRFVFDARVSLQDLADTYQPPFKSCVKQGRASGIMCAYNRVNGVPSCADFNLLTKTAREKWDFNGYITSDCNAVAIIHDQQGYAKSPEDAVADVLRAGMDLECGSYLSDHAKSAVLQKKVPISEIDRALHNLFSIRIRLGLFNGNPTKLSFGMIGPNNVCSKKHQYLALEAARSGIVLLKNSDALLPLPKTNPALSLAVIGPNANDFLTLAGNYAGPPCRNMTVLQGLHHYVKNTVFHPGCDGGPKCPTAQIEEAVEVARKVDYVVLVMGLNQSEEMEDLDRVQLDLPGKQLELINSVAKASKRPVILVLLCGGPVDITSPKYNHKIGGILWAGYPGELGGIALAQIIFGDHNPGGRLPVTWYPKDYIKVPMTDMRMRADPSSGYPGRTYRFYKGPRVYKFGYGLSYSKYSYEFVSVIHEKLHFNQSSTHLMMDENSETIRYKLVSELGEETCQSKMVSVTVGVKNHGSMVGRHPVLLFMKPGKHRSGSPMKQLVGFESVLLDAGEMTHIEFELSPCEHLSRANEAGLMVIEEGSHMLLVGDAEYPIHIII 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0427 777 Pfam Glycosyl hydrolase family 3 C-terminal domain 402 633 IPR002772 GO:0004553|GO:0005975
Lal17g0427 777 Gene3D - 54 376 IPR036962 GO:0004553|GO:0005975
Lal17g0427 777 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 402 636 IPR036881 GO:0004553|GO:0005975
Lal17g0427 777 Pfam Glycosyl hydrolase family 3 N terminal domain 107 357 IPR001764 GO:0004553|GO:0005975
Lal17g0427 777 PRINTS Glycosyl hydrolase family 3 signature 114 133 IPR001764 GO:0004553|GO:0005975
Lal17g0427 777 PRINTS Glycosyl hydrolase family 3 signature 208 224 IPR001764 GO:0004553|GO:0005975
Lal17g0427 777 PRINTS Glycosyl hydrolase family 3 signature 282 300 IPR001764 GO:0004553|GO:0005975
Lal17g0427 777 SMART Fn3_like_2 700 770 IPR026891 -
Lal17g0427 777 Pfam Fibronectin type III-like domain 702 768 IPR026891 -
Lal17g0427 777 Gene3D - 387 634 IPR036881 GO:0004553|GO:0005975
Lal17g0427 777 PANTHER GLYCOSIDE HYDROLASE FAMILY 3 PROTEIN 6 776 - -
Lal17g0427 777 PANTHER SUGAR HYDROLASE-RELATED 6 776 IPR044993 GO:0009044|GO:0045493
Lal17g0427 777 Gene3D Immunoglobulins 663 775 IPR013783 -
Lal17g0427 777 SUPERFAMILY (Trans)glycosidases 42 400 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0427 Lal-Chr17 2871327 2876859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0427 27 773 Glycoside Hydrolase AT1G78060 64.847 0.0 1011
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0427 - - aprc:113867121 1313.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0427 17 2871327 2876859 Lal17g0427 17 2871327 2876859 ECH