Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0419 ATGATCAAAGGAAGAGAAACCAAAGCAGCACCCTCTACAGATTTATTAGTATGTTTCCCTTCTAGAGCTCATCTTAGTCTAATGCCTAAGCCCATTTGTAGTCCAGCTAGGCCTTCTGAGCCCAACAAACTAGGCCGTTACCACCGTCGTAAGAGGTCAGTGTCGAAAGGTGGCGGTGGTGGTCAAGCAGCTAGTCCTATTCTATGGGCAAAAAGTACAAAGTCAATGGGGTCAGAGATTTCAGAACCAACCTCTCCAAAAGTTACTTGTGCTGGCCAAATCAAGGTGAGGCCTAAAACCAATGATTGTAGAAATTGGCAATCAGTAATGGAAGAGATAGAGAAAATCCACAATGACAAGAAGCAGAAGAAGCGTCTCAACTGGGTTGAAACTCTTGGTTTTAAAAAGGAGGTAATGCAATTCTTGACTTGTTTAAGAAGCATAAGGTTTGACCTAAGGTGCTTTGGATCCTTCCCTGGGACGGATATAGCCACCGAAGACGACGATGAAGAAGATGAAGATGATGATGTTGAAGATGAAGAAGGGTGTCATGAAAGTGATGTAAAAGTAGAAGAGTGTCATGAAAATGAAACTTCGAGAACTGTGTTTTCTAAATGGTTCATGGTGTTACAAGAGAATAATCAAAATAGTGAATTGAAGGAGAAAGATAAGGTAACTAAAGATGATGAAACAATTTCTGAGAACAATGTTCCTCCACCAAATGCATTGTTGCTCATGCGTTGTAGGTCTGCTCCTGCAAAAAGCTGGCTGAAAGAAGAGAGTGAAGGTGGTGGTGATAATCATGAAGAAAAAGAAAATGAAGAGCATGAACAAAAAGAAAAGGAAAAGGTAGAGGTAAAGGTATTAAAGAAAGGGCAAAGCTTGAAGTCTTTAATGGAAAAAGAGAAGAGAAATAATGATAACAATTTGGTAGTGATGCAATATGACAATGATTTTTACGAGCTTTCATCTGATATTGCCAAGGAGACATGGATTGTTGGTGACCTAAGAGATTCATTATCAAGGAGTAGGAGTTGGAAAAGATGA 1047 0.3964 MIKGRETKAAPSTDLLVCFPSRAHLSLMPKPICSPARPSEPNKLGRYHRRKRSVSKGGGGGQAASPILWAKSTKSMGSEISEPTSPKVTCAGQIKVRPKTNDCRNWQSVMEEIEKIHNDKKQKKRLNWVETLGFKKEVMQFLTCLRSIRFDLRCFGSFPGTDIATEDDDEEDEDDDVEDEEGCHESDVKVEECHENETSRTVFSKWFMVLQENNQNSELKEKDKVTKDDETISENNVPPPNALLLMRCRSAPAKSWLKEESEGGGDNHEEKENEEHEQKEKEKVEVKVLKKGQSLKSLMEKEKRNNDNNLVVMQYDNDFYELSSDIAKETWIVGDLRDSLSRSRSWKR 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0419 348 MobiDBLite consensus disorder prediction 217 243 - -
Lal17g0419 348 MobiDBLite consensus disorder prediction 163 182 - -
Lal17g0419 348 MobiDBLite consensus disorder prediction 30 67 - -
Lal17g0419 348 MobiDBLite consensus disorder prediction 161 195 - -
Lal17g0419 348 PANTHER CHLOROPLAST PROTEIN HCF243-RELATED 3 348 - -
Lal17g0419 348 Coils Coil 267 287 - -
Lal17g0419 348 MobiDBLite consensus disorder prediction 217 231 - -
Lal17g0419 348 MobiDBLite consensus disorder prediction 255 285 - -
Lal17g0419 348 PANTHER OS09G0370000 PROTEIN 3 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0419 Lal-Chr17 2819043 2820089 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0419 - - gmx:100814916 397.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0419 17 2819043 2820089 Lal17g0419 17 2819043 2820089 ECH
Lal17g0419 17 2819043 2820089 Lal4g0374 4 2557976 2558998 LSH