Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0414 ATGGCTGGTGGGGGATTTGAGGTCTCTGATTCACCAGCTGCTGAATTTGATGGCAAGATAACATTCTCCCTTGTTATTACTTGCATTGTTGTTGCATCCAGTGGACTCATATTTGGATATGACCTTGGAGTTTCAGGAGGTGTTTCAACGATGGTACCATTTCTTGAAAAATTCTTCCCAGACGTTGTAAGAAAGGCTGCTAGCGCAGAAACAAACATGTACTGTGTTTTTGACAGTCAAGTTTTGACATTATTTACATCCTCTCTGTATCTGGCTGGATTAGTGTCATCTCTAGCTGCTGGTCGAGTCACTTCGGCTATGGGTCGGAGAAACACCATCTTATTGGGTGGTGTCATCTTCCTTGCCGGTGGTGCCATTAACGGAGGTGCTCGAAATCTTGTCATGCTCATCGTTGGTCGTCTCCTTCTTGGTTTAGGGATAGGTTTCACTAATCAAGCTGGACCATTGTATCTTTCTGAAGTTGCTCCACCCAAATGGAGAGGTGCATTTAGCACAGCTTTCCAATTCTTCAATCAACTTGGTGTGTTAATGGCAGGAATCATAAACTACTTCACAGCCAAGCACAGTTGGGGTTGGAGACTCTCTCTTGGCCTTGCAGTGGCCCCTGCAACAATTATGACACTTGGTTCCTTACTTATATCAGACACCCCCACCAGCTTAGTTGAACGTGGCAAAATAGACCTAGCTAAAAAAGCATTACACAAAGTCAGAGGGTCTAACATTGATGTTCAACCTGAGTTGGAAAAACTCATAAAATCATCAGAAGTTGCTAAAGCTATGAAGCAGGAACCCTTTAGAACCATATTTGAGAAGCAGTTTCGACCTCAGTTGGTATTTGCAATTGCTATCCCATTTTTTCAGCAGCTTACTGGGATCAACATTGTTGCATTTTATGCACCTAACCTCTTTCAAACTGTGGGGTTTGGAAATGATGCTGCTTTGCTTGCTACCATTATACTTGGAGCTGTCAACCTTGTTTCAATCCTAGTCTTCTCTTCTATTGTTGATCGGTGTGGTCGAAGATTCTTGTTCATATTGGGCGGCATTCAGATGCTTCTCTGTCTGGTTGTGGTGGCTATTGTGCTAGCAATTGGGACTGGTGTTCATGGTACAAAGAACTTAGAGAAGGGATACACTGAACTGGTTTTGGTGGTAATGTGCATCTACTCAGCAGGTTTTGGTTTGTCATGGGGTCCACTACTATGGCTAATTCCAAGTGAAATATTCCCTCTAAAAATCAGAAATACAGGACAAAGCATAGCTGTTGCTGTGCAGTTCATAACCATATTTATTTTAGCTCAGACATTCTTGACAATGTTATGTCACTTTAAGTTCGCAGCTTTTTTGTTTCATGCTGGTTGGGTTCTAGTGATGACAATGTTTATCACACTTTTCTTGCCTGAGACCAAAGGAATTCCTTTGGAATCAATCTATATCATTTGGTGCAGACACTGGTTTTGGCGCAGGTTTGTTAAAGGAGTAGTTCTGGGAGACTCCACTGACTAA 1527 0.4237 MAGGGFEVSDSPAAEFDGKITFSLVITCIVVASSGLIFGYDLGVSGGVSTMVPFLEKFFPDVVRKAASAETNMYCVFDSQVLTLFTSSLYLAGLVSSLAAGRVTSAMGRRNTILLGGVIFLAGGAINGGARNLVMLIVGRLLLGLGIGFTNQAGPLYLSEVAPPKWRGAFSTAFQFFNQLGVLMAGIINYFTAKHSWGWRLSLGLAVAPATIMTLGSLLISDTPTSLVERGKIDLAKKALHKVRGSNIDVQPELEKLIKSSEVAKAMKQEPFRTIFEKQFRPQLVFAIAIPFFQQLTGINIVAFYAPNLFQTVGFGNDAALLATIILGAVNLVSILVFSSIVDRCGRRFLFILGGIQMLLCLVVVAIVLAIGTGVHGTKNLEKGYTELVLVVMCIYSAGFGLSWGPLLWLIPSEIFPLKIRNTGQSIAVAVQFITIFILAQTFLTMLCHFKFAAFLFHAGWVLVMTMFITLFLPETKGIPLESIYIIWCRHWFWRRFVKGVVLGDSTD 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0414 508 CDD MFS_STP 30 475 IPR044778 GO:0015145|GO:0015749
Lal17g0414 508 PRINTS Sugar transporter signature 35 45 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal17g0414 508 PRINTS Sugar transporter signature 137 156 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal17g0414 508 PRINTS Sugar transporter signature 294 304 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal17g0414 508 PRINTS Sugar transporter signature 390 411 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal17g0414 508 PRINTS Sugar transporter signature 413 425 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal17g0414 508 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 3 502 IPR045262 GO:0015144
Lal17g0414 508 PANTHER SUGAR TRANSPORTER 3 502 - -
Lal17g0414 508 Pfam Sugar (and other) transporter 28 488 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lal17g0414 508 Gene3D MFS general substrate transporter like domains 12 491 IPR036259 -
Lal17g0414 508 ProSiteProfiles Major facilitator superfamily (MFS) profile. 27 477 IPR020846 GO:0022857
Lal17g0414 508 TIGRFAM SP: MFS transporter, sugar porter (SP) family 24 484 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal17g0414 508 SUPERFAMILY MFS general substrate transporter 30 483 IPR036259 -
Lal17g0414 508 ProSitePatterns Sugar transport proteins signature 2. 142 167 IPR005829 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0414 Lal-Chr17 2783937 2786892 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0414 51 499 Organic Solute Cotransporters AT1G34580 59.735 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0414 K24193 - gmx:100799418 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0414 17 2783937 2786892 Lal17g0414 17 2783937 2786892 ECH