Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0408 ATGAACATCATCATCAAATCCTCCAAATCCCTAACACAGTCTCTTCAAAATCCTAATCACTTATTCACATCTCAATTCTCAACCTCCTTCCTCGTCACCAAAACCCCCAAAGCCTTCAAGAAGAAGCGCAAGCCCAAGCCCAGCCCCCGAACCACCCTCGTCCAAACCGAACCGAACCAAAACCCTAACCTCGAACGCATCGTCGAGCGCGATTCTCTCTTCAGATTCCTCACCAAATCCAAACAATACCTCATTAACCAACCCGAACACGTTCTCCGTCTCGATGACGCCGGTAAGCTCCACCGCGAGCTCGGTTTCCCTCGCGGCCGAAAGGTCCTACGCTCCATCACGCGCCACCCCCTTATTTTTCAGACCTACCGCCACACTGATGGTAAAATGTGGTTCGGGTTCTCTGATCTTATGGAGGACCTCCTCGCTGAGGAGCAATCCATAATGGACTCAATGGAACGAGACCGTGTCGATAAGGTTCGTAAATTGCTCATGATGTCTGCGAAAAAGCGAATTCCTTTGTGTAAACTACATCACTGCAGGGTCCTCTTCGGTATCCCTGATGATTTCAGGGACCAAGTTTCGAGGTACCCGGATTATTTTCGTGTTTGTGTTGAGGAAAATGGATTGAGGGTTTTAGAATTGGTGGATTGGGATCCTCTGTTAGCGGTTAGCGCGATTGAGAAAGAGTTTATGGTTGATGAGAAAGGTGCTAAGAGGAAGTTTAATTTCCCTGTTAAGTATGGGAAGGGTTTGGATTTAGAATTGGAGGATGCTAGAAAGCTTAACCTGTTGAACACGTTACCTTTGGTGTCGCCTTATTCGGATGGGGCAAGATTGGATTTGTGGACATTGGAAGCGGAAAAGTATAGAGTTGGGGTGATTCATGAATTCTTGAGCTTGACATTGGAGAAGAGAGCCTATATACATCACCTTGTGGAGTTTAAGGAGGAGTTTAGTTTGACTAAGCATACTTATCAGATGCTTTTGAAGCAGCCTAGGGCGTTTTATTTGGCGGGGACAGAGATGAATTGGGTTGTGTTCTTGAAGGATGGGTATGATAAGAATGGGGTTCTGATTGAGAAGGATCCGCAGGTGTTGTTAAATGAGAAGTTGTATAAGTATGCACAGATGCCGGAAATGGAGCAGGGTGCTCAGACTACAGTGAGGCAGTGGTTTCAAATGATAGTGAGGCGGTTGCTACAACAATTGAGAAAACATCTTGAGGGAGGGAGACAACAACTTGGGAGGAGAGGGATGGCGACTTGTAGGGAGAGAGATGAAGACACACTAAAAGAGTTTAGGTCTTTAGGATTTTAG 1329 0.462 MNIIIKSSKSLTQSLQNPNHLFTSQFSTSFLVTKTPKAFKKKRKPKPSPRTTLVQTEPNQNPNLERIVERDSLFRFLTKSKQYLINQPEHVLRLDDAGKLHRELGFPRGRKVLRSITRHPLIFQTYRHTDGKMWFGFSDLMEDLLAEEQSIMDSMERDRVDKVRKLLMMSAKKRIPLCKLHHCRVLFGIPDDFRDQVSRYPDYFRVCVEENGLRVLELVDWDPLLAVSAIEKEFMVDEKGAKRKFNFPVKYGKGLDLELEDARKLNLLNTLPLVSPYSDGARLDLWTLEAEKYRVGVIHEFLSLTLEKRAYIHHLVEFKEEFSLTKHTYQMLLKQPRAFYLAGTEMNWVVFLKDGYDKNGVLIEKDPQVLLNEKLYKYAQMPEMEQGAQTTVRQWFQMIVRRLLQQLRKHLEGGRQQLGRRGMATCRERDEDTLKEFRSLGF 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0408 442 MobiDBLite consensus disorder prediction 37 60 - -
Lal17g0408 442 Pfam Plant organelle RNA recognition domain 60 381 IPR021099 GO:0003723
Lal17g0408 442 PANTHER OS09G0473400 PROTEIN 20 388 - -
Lal17g0408 442 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 20 388 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0408 Lal-Chr17 2745685 2748186 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0408 - - gmx:100813429 588.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0408 17 2745685 2748186 Lal17g0408 17 2745685 2748186 ECH