Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0405 ATGGGAGGGGTATCTGATCTTCGAAATTGGGATGAATTGATTCCTGATGCACTAGGTGTAATATTCATCAATCTTTCTCTCCAGGAGAGAGTGACTGTGATCCCAAGGGTATGTAAATCATGGGCTAAAGCAGTAACTGGACCTTACTGTTGGCAAGAGATAGATATTAATGAATGGAGCAATGGTTGTAAACCAGACAAACTTGATCGGATGCTTGAGATGCTGATCACAAGAAGTAGTGGATCCCTCAAGAAGCTGTCTGTTTCTGATGTCCAAACTGAGAGGATTTTCACTTTCATTGCTGAAAATGCCTGCTCCCTCCGGACGTTGCGGCTGCAAAGGTGTAGTATGAGTGATTCTATTGTGGAACACATTGCTGGAAGGCTTTCTATGATTTCTTTCTTGGATGTGAGCTACTGTATTAAAATCGGCGCCTCTGCTCTAGAGATAATTGGCAAGAATTGCAAACTGCTCGAAGGATTGTGTAGAAATATGCATCCATTAGATACTGCAGGAAAGCCCTTACAAGATGATGAAGCTTATGCAATTGCCACCACTATGCCTAAGCTAAAGCATATCGAACTGGCTTATCATCTAGTTAGCACTTCCGGTGTTCTTAAAATACTTTCACATTGTCCTAAGCTTGAATATTTGGACCAAAGGGGATGTTGGGGTGTCACATTGGACAACATATATGTAAAGCAGAAATTTCCAAAACTGAAGGTTTTAGGGCCATTTGTTCTCGACACTTACGGGAATGATGCTTGGGACGATTACTCGGATATCTCAGATTCTTCTGAGTGGGACTTTGTGGATGGTGGCATGGGTGAATACGATGTCGATGATAACGACAGTAATGACGGGATGTGGGATGACGAAGGAAGCCTTGACGATGAGCTTCAGTTCAGGTTTTATGAAGGAATAGAAGATGCAGCAATGTATTGGCCTCCTTCTCCCTAA 960 0.426 MGGVSDLRNWDELIPDALGVIFINLSLQERVTVIPRVCKSWAKAVTGPYCWQEIDINEWSNGCKPDKLDRMLEMLITRSSGSLKKLSVSDVQTERIFTFIAENACSLRTLRLQRCSMSDSIVEHIAGRLSMISFLDVSYCIKIGASALEIIGKNCKLLEGLCRNMHPLDTAGKPLQDDEAYAIATTMPKLKHIELAYHLVSTSGVLKILSHCPKLEYLDQRGCWGVTLDNIYVKQKFPKLKVLGPFVLDTYGNDAWDDYSDISDSSEWDFVDGGMGEYDVDDNDSNDGMWDDEGSLDDELQFRFYEGIEDAAMYWPPSP 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0405 319 PANTHER F-BOX PROTEIN FBW2 6 319 - -
Lal17g0405 319 Gene3D Ribonuclease Inhibitor 52 244 IPR032675 -
Lal17g0405 319 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 6 319 - -
Lal17g0405 319 SUPERFAMILY RNI-like 36 243 - -
Lal17g0405 319 Gene3D - 9 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0405 Lal-Chr17 2727319 2729909 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0405 - - gmx:100810036 537.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0405 17 2727319 2729909 Lal17g0405 17 2727319 2729909 ECH
Lal17g0405 17 2727319 2729909 Lal4g0360 4 2448639 2451376 LSH