Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0402 ATGGATAAAAGCTGTCACTCCTCTGCTGACTCTACTACTTCTAATACTATCACTACCTCCACTGCCACTAGTAACACCACCAACAAAAACACTACTAATCACAATTATCTCAGACAACTCAACAAGCTTTCTCATAAAATTACCAAACCCATTATTAAAAAACCAAACTTTGATCCCCCAACACCTCAAAATCAAACCTTTAACAATCCCAATCAACCACAACAGAACAACATCGACAACAACAACAATAACAACCTTCAGCATCAGCCACCAGTGTACAACATAAACAAAAACGATTTCAGAGATGTAGTTCAAAAACTCACAGGCTCACCTGCACACGACCGCACTATATCACAACCTCCACCTATGCACCAACCAAAACCTCCAACTTCTCGCCTTCACCGTTTCCGTCCTCCACCCCTGGCGCAAATTAGTAACCGCCCTCAGTTACCCCCTTCCAACAACGCCGTTACCGTTAATAACGGTAACTTTAACTTCTCTGGGTTTGGAAGACCCCTAGCGCCGTTATCTCCTCTGCCACCGTTCCCCACCGTCCACGCCGCCGCTGAGTCTCCCGTCTCCGCCTACATGCGCTACCTTCATAATTCGATGCCTGGTGTCGATCCAAATTCGAAACAGTTCTCTGGATTCTCTCCTTTGGCTCCTTTGGTCTCTCCTCGTTGGAACAATTTCGCTCCGCCGCAACAAGAACAACAACAGTTGCTGCAGCCGTTACCGTCGCAGCAGGTGGCGGTTCCTTCATCATCACAGTCGCAGTTTCAGATGCCGATTTCTCCTCTTCCATTTGGGTGCTTGAACTCGCCGATTTCGTCGTACCCTTTGTTTTCCCCAAATTCGGGTCAATTAGGGTTTCCCCAGCTTCCCCTTTCGCCAACAGTGCCTTTTCCGAGTCCTCGATGGAGAGGTCTTTGA 933 0.477 MDKSCHSSADSTTSNTITTSTATSNTTNKNTTNHNYLRQLNKLSHKITKPIIKKPNFDPPTPQNQTFNNPNQPQQNNIDNNNNNNLQHQPPVYNINKNDFRDVVQKLTGSPAHDRTISQPPPMHQPKPPTSRLHRFRPPPLAQISNRPQLPPSNNAVTVNNGNFNFSGFGRPLAPLSPLPPFPTVHAAAESPVSAYMRYLHNSMPGVDPNSKQFSGFSPLAPLVSPRWNNFAPPQQEQQQLLQPLPSQQVAVPSSSQSQFQMPISPLPFGCLNSPISSYPLFSPNSGQLGFPQLPLSPTVPFPSPRWRGL 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0402 310 MobiDBLite consensus disorder prediction 58 90 - -
Lal17g0402 310 MobiDBLite consensus disorder prediction 51 90 - -
Lal17g0402 310 MobiDBLite consensus disorder prediction 234 257 - -
Lal17g0402 310 PANTHER PROTEIN HAIKU1 1 309 IPR039612 -
Lal17g0402 310 PANTHER VQ MOTIF-CONTAINING PROTEIN 9 1 309 IPR039824 GO:1901001
Lal17g0402 310 MobiDBLite consensus disorder prediction 7 34 - -
Lal17g0402 310 MobiDBLite consensus disorder prediction 1 34 - -
Lal17g0402 310 MobiDBLite consensus disorder prediction 111 132 - -
Lal17g0402 310 Pfam VQ motif 88 114 IPR008889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0402 Lal-Chr17 2718015 2718947 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0402 - - lang:109328722 440.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0402 17 2718015 2718947 Lal17g0402 17 2718015 2718947 ECH
Lal17g0402 17 2718015 2718947 Lal4g0357 4 2424147 2425103 LSH