Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0398 ATGTACGGAAGGATGACTATGAGCATCGATGTTCGTCTCACTCAGATACCAAAAAGGAAAACATGGAATACTAAATCAAAATCAGATAATAAAAACTTGTGGCCGCCACACATGTTCCACAACCATAAAGGAATTAATACTACTGTGCTGTGCTCTGCTCCTGATATAAACCCTATGGCGCTTCGTTTTGAGGTTCTTGCCAGGTTCAACCGAGCTCGTGCTGCACGATTGACACTCCCTCACTTTGTGTGTGAAACGCCTTTATTTATGCCAGTAGGCACACAAGGGACTATCAAAGGATTGACTAATAGCCAGCTTGAGGATATTGGCTGCCAAATAATTCTGGGAAATACATATCACTTGGCCCTTCGACCTACTTCTGAGCTTCTAGAGGAAGCTGGTGGTCTTCACAAATTTATGAACTGGCCAAGGGCAATGCTTACAGACTCTGGTGGCTTTCAAATGGTCTCACTGTTACATCTTGCTGATATCACGGAAAAAGGTGTGACATTTCAGTCACCAGTGGATGGAAAGCCAATGCTTTTAACACCTGAGGAGTCAATTCAGATCCAAAATAGAATTGGGGCAGATATCATTATGGCTCTTGATGATGTTGTAAAGACCACCATCACTGGTCCAAGAATTGAGGAAGCTATGTATCGAACACTTAGATGGATTGACAGATGTATAGAAGCTCATGGGAGGCCTCATGATCAAAACTTGTTTGGTATTGTACAAGGTGGTTTGGATCCTGTGTTGAGGGACATTTGTGTCAAAGGCTTGGTGGATCGCAATTTGCCTGGCTATGCTATTGGTGGTCTTGCAGGTGGTGAAGATAAAGATTCATTTTGGCGTGTTGTAGCTCAGTGCACTGGTTCTTTACCAGAGGATAAACCAAGATATGTTATGGGAGTCGGCTATCCACTTGATGTTGTTGTTTGTAGTGCTTTGGGTGCTGACATGTATGATTGTGTTTATCCTACCCGTACAGCACGTTTTGGCACTGCTCTTGTTCCCGAGGGAGTATTAAAACTAAAACAAAGAGCAATGGCTGATGACACCCGTCCGATTGATTCTACATGCTCTTGTATGGTTTGCAAGAACTACAGCAGGGCTTACATCCATATCCTTGTGACAAAAGATGCTATGGGATCTCAGCTTTTGTCATATCATAATTTATATTACATGATGCAGCTTAGTAAGGATCTACACTCATCAATAGTAGAGGGGAGGTTCCCAAAGTTTGTGTGTGACTTTCTAAGCAAAATGTTCCCAGAAGGCGATGTTCCTGAATGGGTCTGTAACGCTATGGAGGTAGCTGGAATCGACATTTCTTCCTGCTGCGCCTTTCCTGAAAGGGTCAGCAATGCTAAGGAGGTGGCTGAGGTAGCTGGAATCGACATTTCTTCCTGCTGCGCCTTTCCTGATAGGGTCAGGAATGCTAAGGAGGTGGCTGGAATCGACATTTCTTCTGACTGCACTCTGTCTTCATCATGCAGAAAACATGGTTCTGATATTATGTCAGATGAATATCACAAGTTAAAATTGGAGATGGAGAGATTAAGAAACATTGAAGATGCATTGAGGAAATAA 1593 0.4306 MYGRMTMSIDVRLTQIPKRKTWNTKSKSDNKNLWPPHMFHNHKGINTTVLCSAPDINPMALRFEVLARFNRARAARLTLPHFVCETPLFMPVGTQGTIKGLTNSQLEDIGCQIILGNTYHLALRPTSELLEEAGGLHKFMNWPRAMLTDSGGFQMVSLLHLADITEKGVTFQSPVDGKPMLLTPEESIQIQNRIGADIIMALDDVVKTTITGPRIEEAMYRTLRWIDRCIEAHGRPHDQNLFGIVQGGLDPVLRDICVKGLVDRNLPGYAIGGLAGGEDKDSFWRVVAQCTGSLPEDKPRYVMGVGYPLDVVVCSALGADMYDCVYPTRTARFGTALVPEGVLKLKQRAMADDTRPIDSTCSCMVCKNYSRAYIHILVTKDAMGSQLLSYHNLYYMMQLSKDLHSSIVEGRFPKFVCDFLSKMFPEGDVPEWVCNAMEVAGIDISSCCAFPERVSNAKEVAEVAGIDISSCCAFPDRVRNAKEVAGIDISSDCTLSSSCRKHGSDIMSDEYHKLKLEMERLRNIEDALRK 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0398 530 PANTHER QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1 57 447 - -
Lal17g0398 530 TIGRFAM Q_tRNA_tgt: tRNA-guanine transglycosylase 63 423 IPR004803 GO:0008479|GO:0101030
Lal17g0398 530 Coils Coil 511 530 - -
Lal17g0398 530 Hamap Queuine tRNA-ribosyltransferase [tgt]. 61 422 IPR004803 GO:0008479|GO:0101030
Lal17g0398 530 SUPERFAMILY tRNA-guanine transglycosylase 59 421 IPR036511 GO:0006400|GO:0016763
Lal17g0398 530 Pfam Queuine tRNA-ribosyltransferase 71 423 IPR002616 GO:0006400|GO:0016763
Lal17g0398 530 TIGRFAM tgt_general: tRNA-guanine family transglycosylase 63 423 IPR002616 GO:0006400|GO:0016763
Lal17g0398 530 Gene3D - 58 424 IPR036511 GO:0006400|GO:0016763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0398 K00777 - gmx:100819664 752.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0398 17 2674747 2683079 Lal17g0398 17 2674747 2683079 ECH