Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0379 ATGACCAATACTAATGCAGAATTGTCTCAGGGAAATGGTGGTGCTTCTCTTCCCCCTTCTAACCCTCAGCCTGGGCCACCAGAACATCAGCTTTCTCAAGTTGGCAGTGGCAATACGATTTTCAAGAGTGGCCCACTATTCATATCTTCCAAAGTATGTATTATACCTTCACGTGTAGGAATCGGATGGACATCGTGGAAGAAAAGGTGGTTTATTTTAACACAAACTTCACTTGTTTTCTTCAGAAGTGATCCATTTTCTGATTTTCAGAGTGCTATCCCTCAGAAGGGAAATGAAGTGAATTTGACCCTCGGTGGCATTGACCTCAACAATTCAGGCAGTGTTGTTGTCAAAGCAGATAAGAAGCTTTTGACTGTACAATTTCCTGATGCTCATGATGGACGAGCTTTCACACTAAAGGCTGAAACTACGGAGGATCTATATGAGTGGAAGACTGCACTCGAGAATGCTCTGGCAAAAGCACCTAGTGCTGCCAATGCGACAGAGCAAAATGGTATCTTCAGGAACGAACAGATTGATTCAATTGATATTTCTATGGACCAGTTGAAGGATAGAGAACCAATGAAATCTACAGTCATTGGCCGTCCAATTTTACTTGCTCTGGAGGATGTTGATGGAACTCCATCATTCTTGGAGAAAGCCCTGCAGTTCTTAGAACAGCATGGAGCCAATATAGAAGGGATTTTGAGACAATCAGCTGATGTTGATGATGTTGAACGTCGAGTTCGGGAATACGAACAAGGAAAAGTGGAGTTTTCTCCAAATGAGGATGCACATGTTATTGGCGATTGTATTAAGCATGTACTTCGGCTATTGCCTTCTTCTCCAGTTCCTGCATCTTGTTGCAAGGCACTGTTAGAAGCTGTCCGAACTGAACGAGGTAGTCGGGTTTCTGCTATGCGTACAGCAATAAATGACACTTTCCCCGAACCAAATCGTCACTTATTGCAAAGAATACTCTTGATGATGCAAACTATTGCTTCCCGAAAAGCTGTGAATAGAATGAGCTCCTCAGCTGTAGCAGCTTGCATGGCACCGTTACTTCTTCGCCCCCTTCTTGCTGGAGATTGTGATATTGAAAATGATTTTGATGTAGGTGGCGATGGTTCAGTACAACTTTTACAAGCAGCTGCTGCAGCAAACCATGCTCAAGCAATTTGTATAACTTTATTAGAAGAATATAACAGCATATTTGGGGAAGGCTCTGAATCCCCTGATATATACACCGACACAGAAGAGAGTGGGTCTGAAAGCGAGGAGGGTACAGATGATGATTTGTCCTATGATGATGAGGATTATGACGATGAAGAAGATGGATCAGTACACGAGTCTGATGTAGATGATGATCTTGTTAGTGAATCCTATAGCGAGACTGGAGAGTCTCAGGCCAATGATGAGCATGATGATAAGGACCATGATCATTCTAGTCCAAGTTCAAAATCCTCAGGCGCGGGTGAAGAATTTAGAGTCACTCGACCATCAAAGTCATTTCGAGGCTCAAAACCTCAGTATCAAGGCATCAAAAGCAGTAAAAATCTAACAAGTCCAACTAAGAATGCTTGCGCAGATCAGTCCAATGAGCCTGCTGACATTATCGGAGGTGTTTCTACTGACCATGCTACAGTGGATAATTCAGATTTTTCTAGCCCTTCTTTATGTATCAAAAAATCTATAACCATGTCCAATGGTGGTGCTCCAAGTCCAACACCTCGGCGCCGCACCATGTTGGGGCGTACTTCTGCACGAAAGAATCTTTCGATGGAATCCATTGATTTTCCTATTGACGATGAAGATGAAATTGAAAGGCTCGAAACCACTAGGACAGAATTACAAACCCAAATTGCACAGGAGGTGGAGGCAAACGTGAAGCTGCAATCTCATATCGATAAGAGAAAGAAAGACTTGCAAGAGCGTCGTCTGGCTCTTGAGGAAGATGTGGCAAAGCTGCAGGAACAGTTGCGCAAGGAAAAGAAATCTCGGACCAAGTTAGACCTTGACGAATTAGCTTTGGTAGAAGTAGATCTCACTGACTTGGAGCGCAAGGTTGAAGAACTTGGGACGCGGCTCAATGCACAACTTGAGCAGAATTCTGGATCTACCTTGGATTCCTATAATCAGTTAGAACAGATACCTTGGATTCCTTCTTTATTTTTACAATCTTAG 2184 0.4309 MTNTNAELSQGNGGASLPPSNPQPGPPEHQLSQVGSGNTIFKSGPLFISSKVCIIPSRVGIGWTSWKKRWFILTQTSLVFFRSDPFSDFQSAIPQKGNEVNLTLGGIDLNNSGSVVVKADKKLLTVQFPDAHDGRAFTLKAETTEDLYEWKTALENALAKAPSAANATEQNGIFRNEQIDSIDISMDQLKDREPMKSTVIGRPILLALEDVDGTPSFLEKALQFLEQHGANIEGILRQSADVDDVERRVREYEQGKVEFSPNEDAHVIGDCIKHVLRLLPSSPVPASCCKALLEAVRTERGSRVSAMRTAINDTFPEPNRHLLQRILLMMQTIASRKAVNRMSSSAVAACMAPLLLRPLLAGDCDIENDFDVGGDGSVQLLQAAAAANHAQAICITLLEEYNSIFGEGSESPDIYTDTEESGSESEEGTDDDLSYDDEDYDDEEDGSVHESDVDDDLVSESYSETGESQANDEHDDKDHDHSSPSSKSSGAGEEFRVTRPSKSFRGSKPQYQGIKSSKNLTSPTKNACADQSNEPADIIGGVSTDHATVDNSDFSSPSLCIKKSITMSNGGAPSPTPRRRTMLGRTSARKNLSMESIDFPIDDEDEIERLETTRTELQTQIAQEVEANVKLQSHIDKRKKDLQERRLALEEDVAKLQEQLRKEKKSRTKLDLDELALVEVDLTDLERKVEELGTRLNAQLEQNSGSTLDSYNQLEQIPWIPSLFLQS 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0379 727 MobiDBLite consensus disorder prediction 1 35 - -
Lal17g0379 727 PANTHER RHO GTPASE-ACTIVATING PROTEIN REN1 3 716 - -
Lal17g0379 727 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 3 716 - -
Lal17g0379 727 MobiDBLite consensus disorder prediction 407 544 - -
Lal17g0379 727 ProSiteProfiles Rho GTPase-activating proteins domain profile. 206 405 IPR000198 GO:0007165
Lal17g0379 727 SMART RhoGAP_3 212 402 IPR000198 GO:0007165
Lal17g0379 727 MobiDBLite consensus disorder prediction 413 461 - -
Lal17g0379 727 SUPERFAMILY GTPase activation domain, GAP 214 407 IPR008936 GO:0007165
Lal17g0379 727 Coils Coil 675 702 - -
Lal17g0379 727 MobiDBLite consensus disorder prediction 467 484 - -
Lal17g0379 727 Pfam PH domain 58 158 IPR001849 -
Lal17g0379 727 MobiDBLite consensus disorder prediction 1 18 - -
Lal17g0379 727 Coils Coil 639 673 - -
Lal17g0379 727 CDD PH 42 154 - -
Lal17g0379 727 Gene3D Rho GTPase activation protein 183 406 IPR008936 GO:0007165
Lal17g0379 727 SUPERFAMILY PH domain-like 31 168 - -
Lal17g0379 727 CDD RhoGAP 215 353 - -
Lal17g0379 727 Coils Coil 607 627 - -
Lal17g0379 727 MobiDBLite consensus disorder prediction 503 531 - -
Lal17g0379 727 ProSiteProfiles PH domain profile. 39 159 IPR001849 -
Lal17g0379 727 SMART PH_update 40 161 IPR001849 -
Lal17g0379 727 Pfam RhoGAP domain 215 358 IPR000198 GO:0007165
Lal17g0379 727 Gene3D - 31 170 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0379 Lal-Chr17 2526348 2534944 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0379 - - gmx:100796201 931.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0379 17 2526348 2534944 Lal17g0379 17 2526348 2534944 ECH