Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0373 ATGAACGAGTCTCCGCGAAGAGATCTCAAAGTCTTCGATTTCAAGGAAGAAGATGAGATCGACGACGATAATCAATTCTCCAAATTCAAAAACCCTATTCGTTCCCCCTCCGACCCCGATTTTCTTCAACATGATGCCCAGGTAGACATTATTGGTGTAAAGAATGTTGCAAGTACTCCTTGTGTTGATGTCGATGCAGTTGGCGGTAACTTTAATTTCGAAAAGGGTGGTTCAGAACCCCCTCTAGACACAGCGGAAGCTATCTTTCATAATAAAGAGGAGAATCCCGAGGTGGAAGCAGCCAAACAATCATATTCCATTAACCATGAAAGTCACTGTCATTTAAAATTAGGTATTCATAAATATAATGAACCAGAGATGGAGGATACAAGTGGTGGTGTATCTTCACCTGAGACAAGCCAGATAGATCCTTCAGGGTCTCTATCCAATAATGAATCAGTCGATGCTGATTCAGAGGCGGATGACTTCATGTTTGAGAGTGCTGGAAGAAGTGCTCCCTCATATATTGCAGAGAATGGTGTATTTAATGTTTCATTGAATAGCTACAGATTGAATGGCATATACGGTTTTGACATGGATGATGCGAATACAGAAGTTGTTCTTCATCCAGATTATGTCGTATACCAGGATAATTATTATATGGGGCCAAAGTTGACCTTTTCAGATTGTTGCGTCAAGATCAATGTTTCAACTTCATGTATAAAGCAAGAATCCTTAGATCTTGAATGGGCAGTTGATGATCTCATTGATATTAAGTGTCAATTATTCCAAAGTAGTGGAACGGTCATTATGAAGCTTCATGTAATATCTTGTAATTCAAGTCAGTCAACTGGTCTAAGCGGCACTTCAGGCATTGAGGAATTGGAGGTTGCGGTTGTTGATTCCAATTGGTCCCTGAGACATACACAGATCACATCTCTTAATATGAAATACTTGGCTATTTGGAATATTGTGCCTAATATGGATATTGAAGGCAATGAAAATGATTCAGATGAACCAAGATGTTACTTCCCCAATTTTGATGAACCTTTTGATGAAGTTGTCTTTCCAAAAGGGGATCCAGATGCTGTTTCCCTAAGTAAAAGAGATGTTGATCTCTTGCAACCAGACACTTTCATCAATGACACAATTATTGATTTTTATATCCAATATCTGAAGAGTCAAATACATACAGATGAAAAGCCTAGATTTCACTTTTTCAATAGCTTTTTCTTTCGAAAGCTGGCTGATATGGACAAAAATCCATCCAGTGCTTCTGATGGCAAAGCAGCATTCTTACGTGTTCGTAAATGGACAAGAAAAGTAAATTTATTTGAAAAGGATTATATCTTCATACCTGTGAACTTCAATCTTCACTGGAGTTTAATAGTCATTTGTCATCCTGGTGAAGCTGTTAATTTTAAAGATAAAGAGCTGGACAAGTCACTTAAAGTACCCTGTATATTGCATATGGATTCTATAAAAGGAAGTCACAGCGGTCTGAAAAATCTCCTGCAAAGGTACTTGTGGGAAGAATGGAAGGAGAGGCATAAGGACGCGTTGGAAGAAAACCTTTCATCAAGATTCCTTCATATGCGTTTTCTTCCACTCGTGTTGCCCCAACAAGACAACTCATTTGACTGTGGCCTCTTTCTGCTGCACTATTTGGAACTCTTCCTTGCTGAAGCTCCTTCTGACTTCAATCCATTCAAACTAACCAAGTTCTCCAACTTTCTCAATGTGGACTGGTTTCCACCTGCCGAGGCTTATCTCAAGCGAACACTTATCCAGAGGTTAATATTTGAACTCGTGGAAAACCATGCTTCTCATGAAAGCTCTTCCTCTGACTGTAGTAACGACGATCACATCTATGTAGAAAATAATGAGAACGGAACTAGCATGCAGCTTCCTGAAATCAATAAGGAGTCCAGTTCCCGTGCTGGCAAGGGAATAGAAATGACTCTGTTGTCATCATCGTCGTCTTTGGATCCTCAATCTTTTAACAATGAAGGCTTGGTTCTTAAGGAGTTTTTTGTGCCAGGAGCTACAGCAGAAACATTACTGGGACAGTGCCAATCTTATGACCAGAGGTCATCTGACTATCATTTCAATGGTTCAATATTTCCAATGGAGGAAGGATCTGGCCTTGGTGAACATCTATTGTATTTGGATGTAGATCCTAACATCCAGCAAGTAGCTGGAATTACACCTCAAACTTGTTCTTTGCCATACTTATCTAAGGATTGTGGAGATGAGACATTTTATACACCTGAGATTTCTCCACGGGCAGAACATGACGTGGATGAGTCATCTCCAGATGCATCAAATGGTGCCTCAGATGATTCAGAAGAAATAGGGGTCATTGAAAATTTCGTAGTTGGAAATGAAGCCCATCCATCAAATGAAGCTGAACGAGGTGAAATAACTTGTTCACCCATTGAAAACCCTGAGCATATAACAGATATGTCTGTTTCTGATGGTAGCGATTTGCCATTTACCTCCTCTATCACGGGAATTTTTCAAGACTTTATGACAAAATCTGACGCCAACAACAATGGAGATCTTCACTCTTCCTCTCAAGAGATTCCAACAGTACCACTGCATCATGTTTCTGATGCAGTAGATGACAAAGTTACTTGTGATAATGGTAAGACGATTGATGATGTAGCACCTGATGTTTATGATGAACAAGCTGCAAAGAGGAGAAAGCTTAAGCCCCCGGAATGCGAAGGCGAGGTAATCCTGACTGAATCCAATTTGGAATCCTGA 2769 0.3991 MNESPRRDLKVFDFKEEDEIDDDNQFSKFKNPIRSPSDPDFLQHDAQVDIIGVKNVASTPCVDVDAVGGNFNFEKGGSEPPLDTAEAIFHNKEENPEVEAAKQSYSINHESHCHLKLGIHKYNEPEMEDTSGGVSSPETSQIDPSGSLSNNESVDADSEADDFMFESAGRSAPSYIAENGVFNVSLNSYRLNGIYGFDMDDANTEVVLHPDYVVYQDNYYMGPKLTFSDCCVKINVSTSCIKQESLDLEWAVDDLIDIKCQLFQSSGTVIMKLHVISCNSSQSTGLSGTSGIEELEVAVVDSNWSLRHTQITSLNMKYLAIWNIVPNMDIEGNENDSDEPRCYFPNFDEPFDEVVFPKGDPDAVSLSKRDVDLLQPDTFINDTIIDFYIQYLKSQIHTDEKPRFHFFNSFFFRKLADMDKNPSSASDGKAAFLRVRKWTRKVNLFEKDYIFIPVNFNLHWSLIVICHPGEAVNFKDKELDKSLKVPCILHMDSIKGSHSGLKNLLQRYLWEEWKERHKDALEENLSSRFLHMRFLPLVLPQQDNSFDCGLFLLHYLELFLAEAPSDFNPFKLTKFSNFLNVDWFPPAEAYLKRTLIQRLIFELVENHASHESSSSDCSNDDHIYVENNENGTSMQLPEINKESSSRAGKGIEMTLLSSSSSLDPQSFNNEGLVLKEFFVPGATAETLLGQCQSYDQRSSDYHFNGSIFPMEEGSGLGEHLLYLDVDPNIQQVAGITPQTCSLPYLSKDCGDETFYTPEISPRAEHDVDESSPDASNGASDDSEEIGVIENFVVGNEAHPSNEAERGEITCSPIENPEHITDMSVSDGSDLPFTSSITGIFQDFMTKSDANNNGDLHSSSQEIPTVPLHHVSDAVDDKVTCDNGKTIDDVAPDVYDEQAAKRRKLKPPECEGEVILTESNLES 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0373 922 MobiDBLite consensus disorder prediction 761 784 - -
Lal17g0373 922 MobiDBLite consensus disorder prediction 129 154 - -
Lal17g0373 922 SUPERFAMILY Cysteine proteinases 360 604 IPR038765 -
Lal17g0373 922 Pfam Ulp1 protease family, C-terminal catalytic domain 379 575 IPR003653 GO:0006508|GO:0008234
Lal17g0373 922 Gene3D - 358 601 - -
Lal17g0373 922 ProSiteProfiles Ubiquitin-like protease family profile. 364 559 IPR003653 GO:0006508|GO:0008234
Lal17g0373 922 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 2B-RELATED 8 912 - -
Lal17g0373 922 Gene3D - 404 536 - -
Lal17g0373 922 MobiDBLite consensus disorder prediction 125 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0373 Lal-Chr17 2491392 2504530 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0373 K08596 - gmx:100800444 1135.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0373 17 2491392 2504530 Lal17g0373 17 2491392 2504530 ECH